PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe3G261500.2.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family WRKY
Protein Properties Length: 198aa    MW: 22368 Da    PI: 7.5061
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe3G261500.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY36.21.2e-11149173124
                        ---SS-EEEEEEE--TT-SS-E.EE CS
               WRKY   1 ldDgynWrKYGqKevkgsefpr.sY 24 
                        ldDgy+WrKYGqK+vk+s +pr sY
  Aqcoe3G261500.2.p 149 LDDGYKWRKYGQKVVKNSLHPRvSY 173
                        59********************455 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.2E-13134173IPR003657WRKY domain
SuperFamilySSF1182901.96E-10141173IPR003657WRKY domain
PROSITE profilePS5081113.253144173IPR003657WRKY domain
SMARTSM007741.3E-5149194IPR003657WRKY domain
PfamPF031063.5E-8150173IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    Send to blast
MEGDPRASSS GCFEPVVRFS TTTQPIHEMG FVQFEENQQG GLSFLVPSSQ SSHEVSLNFN  60
NNNNNNSTCV GLFSHNNLVS RPSWNNDDQV GTLDPKVGKD DENCVGGIVN DGNNSWWRSS  120
SSEKNKMKVR RKLREPRFCF QTRSDIDVLD DGYKWRKYGQ KVVKNSLHPR VSYFTELRIV  180
FKLLPEVIIV AHTPIVE*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1127133KVRRKLR
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00618PBMTransfer from AT2G44745Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHM6220663e-45HM622066.1 Medicago truncatula STP mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003521060.13e-64probable WRKY transcription factor 12
RefseqXP_028225005.13e-64probable WRKY transcription factor 12
TrEMBLA0A2G5CI571e-144A0A2G5CI57_AQUCA; Uncharacterized protein
STRINGAquca_053_00058.11e-123(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44745.19e-36WRKY family protein