PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe3G265100.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family Trihelix
Protein Properties Length: 173aa    MW: 20038.8 Da    PI: 9.9585
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe3G265100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix38.14e-121094186
           trihelix  1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
                       +W++  + +Li+a  ++  +l+rg+l++++W+ev++++     + ++ +++ +qCk++++ ++k+yk ++           s++p+ ++l+
  Aqcoe3G265100.1.p 10 CWSEGATATLIDAWGDRYLQLSRGNLRQKDWKEVADAVnsrqdSIKKPRKTDVQCKNRIDTIKKKYKLERSKPLP------SKWPFHSHLD 94
                       7*************************************88665445557799***************87765443......4677777765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138372.5E-24896No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 173 aa     Download sequence    Send to blast
GSGSGGREDC WSEGATATLI DAWGDRYLQL SRGNLRQKDW KEVADAVNSR QDSIKKPRKT  60
DVQCKNRIDT IKKKYKLERS KPLPSKWPFH SHLDQLIGTP NAFREIAKAI VKFGEVYERI  120
ESSKQQQIME LERQRMEFTK DLEFQRMQMF MEAQLELEKT KRPKYTPGAG EN*
Functional Description ? help Back to Top
Source Description
UniProtTranscription regulator that may repress the maturation program during early embryogenesis. {ECO:0000269|PubMed:21330492}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00488DAPTransfer from AT5G05550Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023903719.12e-74trihelix transcription factor ASIL2-like
SwissprotQ9LJG81e-36ASIL2_ARATH; Trihelix transcription factor ASIL2
TrEMBLA0A1R3KN204e-80A0A1R3KN20_9ROSI; Putative transcription factor
STRINGEOY177213e-70(Theobroma cacao)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05550.11e-51sequence-specific DNA binding transcription factors