PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe3G268800.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family ERF
Protein Properties Length: 293aa    MW: 32872.6 Da    PI: 9.6424
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe3G268800.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.21.1e-19170220255
                AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                        +y+GVr+++ +g+++AeIrdp +ng  +r++lg+f tae+Aa a+++a+ +++g
  Aqcoe3G268800.1.p 170 HYRGVRQRP-WGKFAAEIRDPAKNG--ARVWLGTFETAEDAALAYDRAAFRMRG 220
                        8********.***********9987..*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000185.48E-34169228No hitNo description
Gene3DG3DSA:3.30.730.102.0E-32169228IPR001471AP2/ERF domain
PROSITE profilePS5103224.276170228IPR001471AP2/ERF domain
SMARTSM003803.6E-39170234IPR001471AP2/ERF domain
PfamPF008477.4E-14170220IPR001471AP2/ERF domain
SuperFamilySSF541712.48E-23170230IPR016177DNA-binding domain
PRINTSPR003676.0E-11171182IPR001471AP2/ERF domain
PRINTSPR003676.0E-11194210IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0001944Biological Processvasculature development
GO:0010200Biological Processresponse to chitin
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0051301Biological Processcell division
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    Send to blast
MYQSKNSDSD FGLIDSISRH LLETSNSNTM SFSSSNPSIY CRSSSFSSLF PCLTENWGDL  60
PLKVDDSEDM LVYGVLRDAF HDGWLPCLDS SNLTVNSVKS EPIDQRFQLQ QQQQQQQQHH  120
QQQQQQQQHQ QQQQLAHQHH QLQNVMMNTR IPEKATKPVV AKPPVVKGKH YRGVRQRPWG  180
KFAAEIRDPA KNGARVWLGT FETAEDAALA YDRAAFRMRG SRALLNFPLR VGLNESMTQQ  240
QPIQGTSKRS SPEPTSSSAS SCLTDNGSPK RRKKSVKSES QSGGELVSKL SQ*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A5e-42167235270ATERF1
3gcc_A5e-42167235270ATERF1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1268274PKRRKKS
Functional Description ? help Back to Top
Source Description
UniProtActs as a transcriptional activator and may be involved in disease resistance pathways. Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways mediated by ethylene, that seems to depend on a protein kinase cascade, and to be influenced by methyl-jasmonate. {ECO:0000269|PubMed:10652129, ECO:0000269|PubMed:10792818, ECO:0000269|PubMed:7756828, ECO:0000269|Ref.2}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by ethephon (ethylene-releasing compound) in buds and to a lower extent in leaves. Strongly induced by cycloheximide and mechanical stimuli. Wounding leads to a both local and systemic expression, independently of ethylene, and through a de-novo-protein-synthesis-independent regulation. Wound induction is reduced by methyl-jasmonate. Induction by purified xylanase from Trichoderma viride (TvX) and another elicitor from Phytophthora infestans (PiE), that appears to be mediated by both protein kinases and protein phosphatases. {ECO:0000269|PubMed:10652129, ECO:0000269|PubMed:12090623, ECO:0000269|PubMed:7756828, ECO:0000269|Ref.2}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010258782.15e-85PREDICTED: ethylene-responsive transcription factor 2-like
SwissprotQ404794e-78ERF2_TOBAC; Ethylene-responsive transcription factor 2
TrEMBLA0A2G5CBL70.0A0A2G5CBL7_AQUCA; Uncharacterized protein
STRINGAquca_067_00004.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47220.19e-48ethylene responsive element binding factor 2
Publications ? help Back to Top
  1. Nakano T,Nishiuchi T,Suzuki K,Fujimura T,Shinshi H
    Studies on transcriptional regulation of endogenous genes by ERF2 transcription factor in tobacco cells.
    Plant Cell Physiol., 2006. 47(4): p. 554-8
    [PMID:16452120]