PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe3G269000.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family ERF
Protein Properties Length: 260aa    MW: 29289.5 Da    PI: 4.5007
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe3G269000.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2621.4e-19120170255
                AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                        +y+GVr+++ +g+++AeIrd    + + +r++lg+f+ta eAaka+++a+ +++g
  Aqcoe3G269000.1.p 120 HYRGVRRRP-WGKYAAEIRDS---KrQGARVWLGTFDTAIEAAKAYDRAAFNMRG 170
                        7********.**********3...2224*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.103.4E-31119179IPR001471AP2/ERF domain
PfamPF008478.6E-15120170IPR001471AP2/ERF domain
SuperFamilySSF541713.79E-22120180IPR016177DNA-binding domain
CDDcd000188.00E-31120178No hitNo description
PROSITE profilePS5103222.998120178IPR001471AP2/ERF domain
SMARTSM003801.0E-35120184IPR001471AP2/ERF domain
PRINTSPR003671.8E-10121132IPR001471AP2/ERF domain
PRINTSPR003671.8E-10144160IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    Send to blast
MTTPDEASAL DLIRQHLLGD FASLESFLTD LCSPKASSLE ENSEVYEIPS ESFYSSSPSS  60
SDSYVVDSEL EVYDYLNTNE VKLPESDIFQ FETKPQLKEE HVNVSVPEEV VSSDSDEQRH  120
YRGVRRRPWG KYAAEIRDSK RQGARVWLGT FDTAIEAAKA YDRAAFNMRG SKAILNFPLE  180
IGNQCNDLPV DKISRKRRNA NENEEKNIKK KKKENLLESD NTASVLQSSF WDGLDFSINF  240
DVPLLSPIAS VGYPQLMVI*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A2e-30119181163ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1195212KRRNANENEEKNIKKKKK
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00556DAPTransfer from AT5G51190Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010275423.13e-72PREDICTED: ethylene-responsive transcription factor ERF105-like
TrEMBLA0A2G5CBP50.0A0A2G5CBP5_AQUCA; Uncharacterized protein
STRINGAquca_067_00006.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51190.11e-40ERF family protein