PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe3G269100.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family ERF
Protein Properties Length: 318aa    MW: 35408.9 Da    PI: 6.388
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe3G269100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.51.9e-19143193255
                AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                        +y+GVr+++ +g+++AeIrdps   k +r++lg+f ta eAaka+++a+ k++g
  Aqcoe3G269100.1.p 143 HYRGVRQRP-WGKFAAEIRDPSR--KGARVWLGTFETAIEAAKAYDRAAFKMRG 193
                        8********.**********854..34*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.46E-32142201No hitNo description
Gene3DG3DSA:3.30.730.101.7E-32142202IPR001471AP2/ERF domain
PROSITE profilePS5103224.092143201IPR001471AP2/ERF domain
SMARTSM003801.9E-38143207IPR001471AP2/ERF domain
PfamPF008474.9E-14143193IPR001471AP2/ERF domain
SuperFamilySSF541711.05E-22143203IPR016177DNA-binding domain
PRINTSPR003671.5E-13144155IPR001471AP2/ERF domain
PRINTSPR003671.5E-13183203IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    Send to blast
MATTTPDEAS TIDLIRQHLL GDFASLESFL NSDFSFCNSK LQSENDQIKP PELLLLRSQS  60
EPIYSQSTTT TTTSSSSSES TISEPEAKHN FFQVFPNSSI SQSKIHESSF NKRRPSLKLD  120
VPSLKPQQAQ VIVSSGESEE KKHYRGVRQR PWGKFAAEIR DPSRKGARVW LGTFETAIEA  180
AKAYDRAAFK MRGSKAILNF PLEINSAEFE TTQPIITTKK TTNSNPRKRS RNVEVIKIEE  240
EEEEEVVEKK MIKKEKLEET IDSSSSSVVV VVTPPPLTPS SWMTAWEGLE VNGVFNVPPL  300
SPLSPHPSIG YSQLMVT*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A4e-36142208470ATERF1
3gcc_A4e-36142208470ATERF1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010275423.17e-86PREDICTED: ethylene-responsive transcription factor ERF105-like
TrEMBLA0A2G5CBN70.0A0A2G5CBN7_AQUCA; Uncharacterized protein
STRINGAquca_067_00007.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17490.13e-37ethylene responsive element binding factor 6