PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe3G284800.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family MYB_related
Protein Properties Length: 220aa    MW: 24376.3 Da    PI: 6.9374
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe3G284800.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding45.12.3e-145390847
                       HHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
    Myb_DNA-binding  8 EdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                       Ed  lv+++k++ ++ W++Ia++++ gRt++ +k+rw+++
  Aqcoe3G284800.1.p 53 EDRALVEGHKKHNNR-WAKIAEEIP-GRTDNAVKNRWNSV 90
                       6678899********.*********.***********987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129417.4813595IPR017930Myb domain
SuperFamilySSF466899.33E-133797IPR009057Homeodomain-like
SMARTSM007171.4E-113993IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.603.4E-154193IPR009057Homeodomain-like
CDDcd001673.09E-144391No hitNo description
PfamPF002491.6E-125390IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    Send to blast
MLERRLAQEG VTTASGTRLT RGRERRRSGV VYSRANDGSP GCWTEDEDRA LVEDRALVEG  60
HKKHNNRWAK IAEEIPGRTD NAVKNRWNSV KRRQSSKEKK YCYSKNLLPS PILQKSINNI  120
SNKSTGSTNK VGNAATSDCY IHMADTIAVP IAPADQGGEV VALSSLPFNF DVSIFDEEMF  180
SILNEGITDN VMPSDVDHLN PYSVNKEMDL FEMISAANI*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5F1N41e-163A0A2G5F1N4_AQUCA; Uncharacterized protein
STRINGAquca_002_00117.11e-163(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18770.14e-16myb domain protein 98