PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe3G329400.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family WRKY
Protein Properties Length: 546aa    MW: 60208.6 Da    PI: 8.1998
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe3G329400.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY92.33.6e-29245304159
                        ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
               WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                        ++Dg++WrKYGqK  kg+++pr+YYrCt   +Cpv+k+v+r+ ed +++++tYeg+Hnh+
  Aqcoe3G329400.1.p 245 MNDGCQWRKYGQKISKGNPCPRAYYRCTVGpTCPVRKQVQRCVEDMSILITTYEGTHNHP 304
                        58***************************88****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.5E-31230304IPR003657WRKY domain
SuperFamilySSF1182902.09E-26238305IPR003657WRKY domain
PROSITE profilePS5081126.923240306IPR003657WRKY domain
SMARTSM007747.9E-35245305IPR003657WRKY domain
PfamPF031061.8E-25246304IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 546 aa     Download sequence    Send to blast
MEETKKRSST AEGILVKEEY KVESYIEALG KFEKKRKAHD DDDNNNSKLL SPDKKNQRIF  60
KQEDQLEHVK AKVYALREEN ERLKTLLDHA TKEYQTLKMH IFDIVQQDEQ AKKSVHTISS  120
TLHQVEEPHD LVFLSLGRSS SVIRKEDASH NSNKSREGLD VKERLALSLD SKFEVLNSCQ  180
TTETMSNPSL GNISSDSKED ETTEQWTRSA RNLKTKKDEE DDVQPQTQSK KTRVSVRARC  240
DAATMNDGCQ WRKYGQKISK GNPCPRAYYR CTVGPTCPVR KQVQRCVEDM SILITTYEGT  300
HNHPLSMSAT AMASSTSAAA SMLTSGSTSS SRSFPGTSLI PNTSNNPHSL NFNLSDNYRS  360
RPQLYVPNNS SFSSHPTITL DLTAPSASSC SLYTPSQFNK YPPANTGFSS NSTIPTAWNS  420
QLYTGYGNNK SLIGTGTQNQ EYTYAPNSRN QIHPQQPLSA ENITKAITSD PSFRTALEAA  480
ISTIVGGGGV DGINPGKQGG GDNNISKYSP FSPANNSVYL NNTTSSSLKP DHDQQGSLLF  540
LSPPS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A3e-192453051776Probable WRKY transcription factor 4
2lex_A3e-192453051776Probable WRKY transcription factor 4
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_026381382.11e-120probable WRKY transcription factor 72
TrEMBLA0A2G5F3H80.0A0A2G5F3H8_AQUCA; Uncharacterized protein
STRINGAquca_002_00516.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15130.14e-65WRKY DNA-binding protein 72