PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe3G361700.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family NAC
Protein Properties Length: 197aa    MW: 22474.5 Da    PI: 5.307
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe3G361700.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM90.52.9e-28231492128
                NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 
                        ++Gf+F P+d e+v +yLk+kv  +++++ e++++vd+y+++  ++p +   +a+ +e +fF++++++y +++++   t+ gyW+  g++ +
  Aqcoe3G361700.1.p  23 ARGFKFAPKDVEVVEHYLKNKVFCRDMPC-EILQHVDLYHLNADEIPmSeFKYAKANEAFFFTNNHRRYLHDNQTMCPTSGGYWQVIGTEDQ 113
                        68***************************.89***************543333467799********************************* PP

                NAM  92 vlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                        +l+ ++  +  k+tL+f++g+ap+ + ++ v++eyrl
  Aqcoe3G361700.1.p 114 ILK-DNDIIAYKNTLIFFSGKAPDNRVSNYVIEEYRL 149
                        **9.9999***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.83E-3022176IPR003441NAC domain
PROSITE profilePS5100530.88522176IPR003441NAC domain
PfamPF023651.3E-1324149IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    Send to blast
MSDIHPTGNF MVVPCKDGDK ILARGFKFAP KDVEVVEHYL KNKVFCRDMP CEILQHVDLY  60
HLNADEIPMS EFKYAKANEA FFFTNNHRRY LHDNQTMCPT SGGYWQVIGT EDQILKDNDI  120
IAYKNTLIFF SGKAPDNRVS NYVIEEYRLN PEVNTTDDIN IRNNIENLVL CKVQLQNPGR  180
GIEEPVVEAA KISQSG*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A1e-212217315165Stress-induced transcription factor NAC1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5EIQ47e-90A0A2G5EIQ4_AQUCA; Uncharacterized protein
STRINGAquca_007_00156.11e-90(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G46590.15e-26NAC domain containing protein 96