PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe3G368500.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family NAC
Protein Properties Length: 358aa    MW: 41102.4 Da    PI: 9.2733
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe3G368500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1522.9e-47471752128
                NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 
                        ppG+rF P d+el+ +yL +k+ ++kl++ + ik+v+iyk++P+dL +  k+++ +ek wyfF++rd+ky++g+r+nra+ +gyWkatg d+
  Aqcoe3G368500.1.p  47 PPGYRFAPGDDELLEHYLMNKIGNRKLPI-NRIKDVNIYKFNPQDLVEkfKIYGeREKVWYFFTPRDRKYPKGNRPNRAAGDGYWKATGADR 137
                        9****************************.77**************7424443336779********************************* PP

                NAM  91 evlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                         ++sk+++++g++k Lvfy+g+ pkg+kt+W+mheyr+
  Aqcoe3G368500.1.p 138 IIFSKTQTKIGCRKALVFYSGKPPKGRKTKWIMHEYRI 175
                        ************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.32E-5344200IPR003441NAC domain
PROSITE profilePS5100552.16746202IPR003441NAC domain
PfamPF023655.5E-2547175IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    Send to blast
MNNTSSLRVK VDTSTSIQAS AGIEAVVAHT TTDVILDEDE KYLRSFPPGY RFAPGDDELL  60
EHYLMNKIGN RKLPINRIKD VNIYKFNPQD LVEKFKIYGE REKVWYFFTP RDRKYPKGNR  120
PNRAAGDGYW KATGADRIIF SKTQTKIGCR KALVFYSGKP PKGRKTKWIM HEYRIEGESP  180
RSRMGLHDMR LDDYVLCRIH EKVVSVGDKT KATKAVTNKK KKNVRKKKND KPLDPSNSNP  240
VSALESNDNP LSSVDSVDDL IVDADGRDHL MAMCEGMGIS DPYSEYFENP YSDFQSVESV  300
FNMDNKYYST YQAPTYFKDE SYQTNVEKYS QFNQKRSMDF TRGENVLNFP PLSPLDM*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A2e-554520214168Stress-induced transcription factor NAC1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021279229.13e-68NAC domain-containing protein 67-like
TrEMBLA0A2G5F5630.0A0A2G5F563_AQUCA; Uncharacterized protein
STRINGAquca_002_00864.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77450.15e-54NAC domain containing protein 32