PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe3G382800.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bZIP
Protein Properties Length: 168aa    MW: 19650.8 Da    PI: 8.9357
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe3G382800.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_145.12.2e-1481130554
                        CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 
                        +++rr+++NRe+ArrsR RK+++++eL   v  L +eN++L+++l++ ++
  Aqcoe3G382800.1.p  81 RKQRRMISNRESARRSRMRKQKQLDELWSQVVRLRNENRQLIDKLNHVSE 130
                        79******************************************999876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.5E-1477141IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.88779142IPR004827Basic-leucine zipper domain
PfamPF001708.0E-1281130IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.63E-1281131No hitNo description
Gene3DG3DSA:1.20.5.1704.3E-1181154No hitNo description
CDDcd147027.27E-1782133No hitNo description
PROSITE patternPS0003608499IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    Send to blast
MQPGELNGHR YQAPADQQYL GHFSTMQNDM STLHINGFLR PITHYQISPP FNDFPPQSSS  60
FSNTSTSDEA EEQQLSIIDE RKQRRMISNR ESARRSRMRK QKQLDELWSQ VVRLRNENRQ  120
LIDKLNHVSE SHNRAVQENT HLKEEASEIR KMLSSLQIDN SYNNLRN*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
193100RRSRMRKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in somatic embryogenesis. Acts as positive regulator of BHLH109. {ECO:0000269|PubMed:26973252}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022844772.12e-66basic leucine zipper 43-like
SwissprotQ9FMC24e-36BZP43_ARATH; Basic leucine zipper 43
TrEMBLA0A2G5F5U61e-119A0A2G5F5U6_AQUCA; Uncharacterized protein
STRINGAquca_002_00991.11e-120(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G30530.16e-39basic leucine-zipper 42
Publications ? help Back to Top
  1. Nowak K,Gaj MD
    Stress-related function of bHLH109 in somatic embryo induction in Arabidopsis.
    J. Plant Physiol., 2016. 193: p. 119-26
    [PMID:26973252]
  2. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]