PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe3G398400.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family G2-like
Protein Properties Length: 331aa    MW: 37374.1 Da    PI: 8.7159
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe3G398400.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like971.3e-30159214156
            G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                        k+r+ W++eLH++F++a++qLGGs +AtPk+i+elmkv+gLt+++vkSHLQkYRl+
  Aqcoe3G398400.1.p 159 KARRSWSNELHKKFLNALQQLGGSYVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 214
                        689***************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129411.96156216IPR017930Myb domain
SuperFamilySSF466892.87E-17157217IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.604.8E-27157217IPR009057Homeodomain-like
TIGRFAMsTIGR015571.5E-26159214IPR006447Myb domain, plants
PfamPF002491.1E-7161212IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009737Biological Processresponse to abscisic acid
GO:0055062Biological Processphosphate ion homeostasis
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    Send to blast
MDFIKKMKGI RCEDYMEALE EERHKIQVFH RELPLCLELV TQAIDICKKQ VGIKHECEDV  60
ELISSTETRK LYSPKEKKVD WLKSAQLWNH DFSDQKDKPS QNTIGIEPNR LKGAFRPFQR  120
DEGHRASTAT STSTTAETVG VSPVNRAEEK QRQVESHKKA RRSWSNELHK KFLNALQQLG  180
GSYVATPKQI RELMKVDGLT NDEVKSHLQK YRLHTRRTSA AIHIKDNLHS TQLILVEGLL  240
VQPEESFQDR PTTGDAAQLV TNGVYAPVAA RPQSPLLTSQ RQHKQPSTVH PESKIRGSQA  300
QHCMEDEGTH SDHQSSSSST QSTTVSVSLV *
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in phosphate homeostasis. Involved in the regulation of the developmental response of lateral roots, acquisition and/or mobilization of phosphate and expression of a subset of genes involved in phosphate sensing and signaling pathway. Is a target of the transcription factor PHR1. {ECO:0000269|PubMed:27016098}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00218DAPTransfer from AT1G68670Download
Motif logo
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced under phosphate deprivation conditions. {ECO:0000269|PubMed:27016098}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003631224.11e-79PREDICTED: myb family transcription factor EFM
SwissprotQ8VZS31e-68HHO2_ARATH; Transcription factor HHO2
TrEMBLA0A2G5F6C01e-138A0A2G5F6C0_AQUCA; Uncharacterized protein
STRINGAquca_002_01118.11e-139(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68670.12e-68G2-like family protein
Publications ? help Back to Top
  1. Nagarajan VK,Satheesh V,Poling MD,Raghothama KG,Jain A
    Arabidopsis MYB-Related HHO2 Exerts a Regulatory Influence on a Subset of Root Traits and Genes Governing Phosphate Homeostasis.
    Plant Cell Physiol., 2016. 57(6): p. 1142-52
    [PMID:27016098]
  2. Sun X, et al.
    The GARP/MYB-related grape transcription factor AQUILO improves cold tolerance and promotes the accumulation of raffinose family oligosaccharides.
    J. Exp. Bot., 2018. 69(7): p. 1749-1764
    [PMID:29385617]