PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe3G402900.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family C2H2
Protein Properties Length: 434aa    MW: 48241.4 Da    PI: 9.9563
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe3G402900.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.52.4e-05209231223
                        EETTTTEEESSHHHHHHHHHH.T CS
            zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                        +Cp Cg+ F  ++ L++H+++ H
  Aqcoe3G402900.1.p 209 SCPVCGEIFMKPDALEVHQSVrH 231
                        8******************9988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE patternPS000280208231IPR007087Zinc finger, C2H2
Gene3DG3DSA:3.90.228.109.4E-14233431IPR012317Poly(ADP-ribose) polymerase, catalytic domain
SuperFamilySSF563991.06E-23233432No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003950Molecular FunctionNAD+ ADP-ribosyltransferase activity
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 434 aa     Download sequence    Send to blast
MISKAFSYHI NKDPTFFLIK QSHLISRTIF RSLLSLMAET KNHIKPSKKK YQKGEKKPSW  60
AVVKSFLTRK NFQTGLLQQL QEKPNEESNK RWKKLGFSGS LCNNTKVMQR PETCTIDDNK  120
KRASVVSCTS NGSVSSRSIK APSNDLKRVI RSSSSSALSS SISSRSSAGG SYRGMPLGRF  180
SGCYECRMVD DPSHGVSRRH SSIKESLCSC PVCGEIFMKP DALEVHQSVR HAVSELDPKD  240
TSRNVVEIIF QSSWLKKQAP NCKIDRILKV NNSRKIITRF EDYTNSIKAK ASKDPKKHPR  300
CVADGNELLR FYCTTFCCSL GMNGSSNLCN LVPHCDICSI IRNGFKIEPE VGVCTSATSG  360
KAHDSVTKIS EGEKRAMLVC RVIAGRVKRK EDTGSEEFDS VAGHAGIYTD LEELFVFNPK  420
SILPCFVVIY SGF*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010274362.11e-159PREDICTED: uncharacterized protein LOC104609687
TrEMBLA0A2G5F6I90.0A0A2G5F6I9_AQUCA; Uncharacterized protein
STRINGAquca_002_01163.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75710.18e-90C2H2-like zinc finger protein