PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe3G402900.2.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family C2H2
Protein Properties Length: 327aa    MW: 35772.8 Da    PI: 8.703
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe3G402900.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2171.7e-05102124223
                        EETTTTEEESSHHHHHHHHHH.T CS
            zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                        +Cp Cg+ F  ++ L++H+++ H
  Aqcoe3G402900.2.p 102 SCPVCGEIFMKPDALEVHQSVrH 124
                        8******************9988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE patternPS000280101124IPR007087Zinc finger, C2H2
Gene3DG3DSA:3.90.228.104.5E-14126324IPR012317Poly(ADP-ribose) polymerase, catalytic domain
SuperFamilySSF563994.89E-24126325No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003950Molecular FunctionNAD+ ADP-ribosyltransferase activity
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    Send to blast
MQRPETCTID DNKKRASVVS CTSNGSVSSR SIKAPSNDLK RVIRSSSSSA LSSSISSRSS  60
AGGSYRGMPL GRFSGCYECR MVDDPSHGVS RRHSSIKESL CSCPVCGEIF MKPDALEVHQ  120
SVRHAVSELD PKDTSRNVVE IIFQSSWLKK QAPNCKIDRI LKVNNSRKII TRFEDYTNSI  180
KAKASKDPKK HPRCVADGNE LLRFYCTTFC CSLGMNGSSN LCNLVPHCDI CSIIRNGFKI  240
EPEVGVCTSA TSGKAHDSVT KISEGEKRAM LVCRVIAGRV KRKEDTGSEE FDSVAGHAGI  300
YTDLEELFVF NPKSILPCFV VIYSGF*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010274362.11e-141PREDICTED: uncharacterized protein LOC104609687
RefseqXP_022766363.11e-141uncharacterized protein LOC111311254
TrEMBLA0A2G5F6I90.0A0A2G5F6I9_AQUCA; Uncharacterized protein
STRINGAquca_002_01163.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75710.13e-90C2H2-like zinc finger protein