PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe3G402900.3.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

C2H2

Protein Properties

Length: 260aa MW: 28807.1 Da PI: 8.1359

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe3G402900.3.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.4	1.3e-05	35	57	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +Cp Cg+ F ++ L++H+++ H Aqcoe3G402900.3.p 35 SCPVCGEIFMKPDALEVHQSVrH 57 8******************9988 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE pattern	PS00028	0	34	57	IPR007087	Zinc finger, C2H2
Gene3D	G3DSA:3.90.228.10	2.2E-14	59	257	IPR012317	Poly(ADP-ribose) polymerase, catalytic domain
SuperFamily	SSF56399	2.4E-24	59	258	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003950	Molecular Function	NAD+ ADP-ribosyltransferase activity
GO:0046872	Molecular Function	metal ion binding

Sequence ? help Back to Top
Protein Sequence Length: 260 aa Download sequence Send to blast
MPLGRFSGCY ECRMVDDPSH GVSRRHSSIK ESLCSCPVCG EIFMKPDALE VHQSVRHAVS 60 ELDPKDTSRN VVEIIFQSSW LKKQAPNCKI DRILKVNNSR KIITRFEDYT NSIKAKASKD 120 PKKHPRCVAD GNELLRFYCT TFCCSLGMNG SSNLCNLVPH CDICSIIRNG FKIEPEVGVC 180 TSATSGKAHD SVTKISEGEK RAMLVCRVIA GRVKRKEDTG SEEFDSVAGH AGIYTDLEEL 240 FVFNPKSILP CFVVIYSGF*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_026455075.1	1e-133	uncharacterized protein LOC113356222
TrEMBL	A0A2G5F6I9	0.0	A0A2G5F6I9_AQUCA; Uncharacterized protein
STRING	Aquca_002_01163.1	0.0	(Aquilegia coerulea)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75710.1	3e-89	C2H2-like zinc finger protein

Link Out ? help Back to Top
Phytozome	Aqcoe3G402900.3.p