PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe3G408900.2.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bZIP
Protein Properties Length: 324aa    MW: 34190.2 Da    PI: 5.0441
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe3G408900.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1711.8e-22221283163
                        XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                        e+elkr+rrkq+NRe+ArrsR+RK+ae +eL+++v++L++eN +L+ ele+ ++e++kl se+
  Aqcoe3G408900.2.p 221 ERELKRQRRKQSNRESARRSRLRKQAEYDELAQRVESLKEENGMLRGELERVREECEKLASEN 283
                        89**********************************************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF165968.1E-3957180No hitNo description
Gene3DG3DSA:1.20.5.1703.1E-18214280No hitNo description
PfamPF001702.5E-20221283IPR004827Basic-leucine zipper domain
SMARTSM003382.1E-20221285IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.392223286IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.06E-11224280No hitNo description
CDDcd147021.19E-23226276No hitNo description
PROSITE patternPS000360228243IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    Send to blast
MGNEENEAPT KSPKPSTTQE QPPPSSPATV FHDWASFQVA ATSGRESESK SGEGKKKKPL  60
KRSKGSLGSL NMITGKDNEA GKTSGVSNGG FSQSGESGGE GSSEGSDANS QNDSQHSEKG  120
SADAGVQNGG TTCSVSSGVS QTFPSQAVTN PGMVTNAPPN SVPGPATNLN IGMDYWGGPT  180
PPPVATGRAK LPTVQPPGAI VPSNVVGSRD GIPSELWIQD ERELKRQRRK QSNRESARRS  240
RLRKQAEYDE LAQRVESLKE ENGMLRGELE RVREECEKLA SENASLTERV QKQVGLDSHM  300
DEVNGKPDSD SQAAANVDLT EDC*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1237243RRSRLRK
2237244RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds to the G-box motif (5'-CACGTG-3') and other cis-acting elements with 5'-ACGT-3' core, such as Hex, C-box and as-1 motifs. Possesses high binding affinity to G-box, much lower affinity to Hex and C-box, and little affinity to as-1 element (PubMed:18315949). G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control (Probable). Binds to the G-box motif 5'-CACGTG-3' of LHCB2.4 (At3g27690) promoter. May act as transcriptional repressor in light-regulated expression of LHCB2.4. Binds DNA as monomer. DNA-binding activity is redox-dependent (PubMed:22718771). {ECO:0000269|PubMed:18315949, ECO:0000269|PubMed:22718771, ECO:0000305|PubMed:18315949}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010271193.11e-103PREDICTED: bZIP transcription factor 16-like isoform X2
SwissprotQ501B28e-77BZP16_ARATH; bZIP transcription factor 16
TrEMBLA0A2G5F6V10.0A0A2G5F6V1_AQUCA; Uncharacterized protein
STRINGAquca_002_01218.11e-174(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.15e-52basic region/leucine zipper transcription factor 16
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]