PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe3G408900.6.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bZIP
Protein Properties Length: 408aa    MW: 43178.3 Da    PI: 5.8622
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe3G408900.6.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_170.52.5e-22305367163
                        XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                        e+elkr+rrkq+NRe+ArrsR+RK+ae +eL+++v++L++eN +L+ ele+ ++e++kl se+
  Aqcoe3G408900.6.p 305 ERELKRQRRKQSNRESARRSRLRKQAEYDELAQRVESLKEENGMLRGELERVREECEKLASEN 367
                        89**********************************************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077771.0E-311101IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165961.3E-38141264No hitNo description
Gene3DG3DSA:1.20.5.1701.2E-18298364No hitNo description
PfamPF001703.6E-20305367IPR004827Basic-leucine zipper domain
SMARTSM003382.1E-20305369IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.392307370IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.03E-11308364No hitNo description
CDDcd147021.49E-25310360No hitNo description
PROSITE patternPS000360312327IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 408 aa     Download sequence    Send to blast
MGNEENEAPT KSPKPSTTQE QPPPSSPATV FHDWASFQAY YNSAGTPPIP PPGYFHPSVA  60
SSPQAHPYMW GQHMLPPYGT PPPPYVTMYP HGGLYAHPSM PPGSHPYNPY AMLSPNGTAE  120
ASVAATSGRE SESKSGEGKK KKPLKRSKGS LGSLNMITGK DNEAGKTSGV SNGGFSQSGE  180
SGGEGSSEGS DANSQNDSQH SEKGSADAGV QNGGTTCSVS SGVSQTFPSQ AVTNPGMVTN  240
APPNSVPGPA TNLNIGMDYW GGPTPPPVAT GRAKLPTVQP PGAIVPSNVV GSRDGIPSEL  300
WIQDERELKR QRRKQSNRES ARRSRLRKQA EYDELAQRVE SLKEENGMLR GELERVREEC  360
EKLASENASL TERVQKQVGL DSHMDEVNGK PDSDSQAAAN VDLTEDC*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1321327RRSRLRK
2321328RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds to the G-box motif (5'-CACGTG-3') and other cis-acting elements with 5'-ACGT-3' core, such as Hex, C-box and as-1 motifs. Possesses high binding affinity to G-box, much lower affinity to Hex and C-box, and little affinity to as-1 element (PubMed:18315949). G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control (Probable). Binds to the G-box motif 5'-CACGTG-3' of LHCB2.4 (At3g27690) promoter. May act as transcriptional repressor in light-regulated expression of LHCB2.4. Binds DNA as monomer. DNA-binding activity is redox-dependent (PubMed:22718771). {ECO:0000269|PubMed:18315949, ECO:0000269|PubMed:22718771, ECO:0000305|PubMed:18315949}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010271189.11e-159PREDICTED: bZIP transcription factor 16-like isoform X1
RefseqXP_010271190.11e-159PREDICTED: bZIP transcription factor 16-like isoform X1
RefseqXP_010271191.11e-159PREDICTED: bZIP transcription factor 16-like isoform X1
RefseqXP_010271192.11e-159PREDICTED: bZIP transcription factor 16-like isoform X1
SwissprotQ501B21e-123BZP16_ARATH; bZIP transcription factor 16
TrEMBLA0A2G5F7370.0A0A2G5F737_AQUCA; Uncharacterized protein
STRINGAquca_002_01218.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.16e-81basic region/leucine zipper transcription factor 16
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]