PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe3G424500.2.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

NAC

Protein Properties

Length: 574aa MW: 65349 Da PI: 4.8903

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe3G424500.2.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	39.6	1.6e-12	3	32	99	128
NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 vg+kktLv+y+grap+g++t Wvmheyrl Aqcoe3G424500.2.p 3 SVGMKKTLVYYRGRAPHGTRTGWVMHEYRL 32 69**************************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51005	22.441	1	55	IPR003441	NAC domain
SuperFamily	SSF101941	4.97E-17	3	55	IPR003441	NAC domain
Pfam	PF02365	2.4E-5	4	32	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 574 aa Download sequence Send to blast
MRSVGMKKTL VYYRGRAPHG TRTGWVMHEY RLDERECETA SGLQDAYALC RIFKKSMVGP 60 KTPEYNAPRL NVSHCQWTPN DHSSNIEMSS EGGGADLEIT SYPFASGMYS SDVNQSASFD 120 VNGTRDENKW MQYLTEEAFG PTTPAFPSQE SNMAYVPSTV DIALECARLQ HRLSLPPLEV 180 EDFPQVSFNN STFPQDRPLH ETREGGFLQE IISATSTPQE LINNTNYQDT WQGNYSYFDE 240 FSLHEIEKVE NHQIDDIGSS IPIEQPWGVD NRRFIDIGDM EEVFMTGKTV ENLRGVGMSN 300 KELEKSMFEE HKVVPIENIS NFQRRNEQEN EGETSQHNFT DTDENDFSLG YVNDYQDGIL 360 GDEGDMAGTP TFELHEKVEV NHGMFIASRQ AAKTFFYQIE PSKIVKVKLN EVLSHNFSIT 420 KVKSYHSEIK NRPSFFDKFK TFAREKFRGV RKFSMDSKRG SSVLNQTRSR VILIISLLLT 480 TCIYLGEPCE SIRLQEDLSA TSKNMEDITE EDCSPYLKKV GEDKWNDDKM DSNISSRLTN 540 LGGGHISSVF LNKKWSFLAI ILALFSFGFQ KII*

Sequence ? help Back to Top

Protein Sequence Length: 574 aa Download sequence Send to blast

MRSVGMKKTL VYYRGRAPHG TRTGWVMHEY RLDERECETA SGLQDAYALC RIFKKSMVGP  60
KTPEYNAPRL NVSHCQWTPN DHSSNIEMSS EGGGADLEIT SYPFASGMYS SDVNQSASFD  120
VNGTRDENKW MQYLTEEAFG PTTPAFPSQE SNMAYVPSTV DIALECARLQ HRLSLPPLEV  180
EDFPQVSFNN STFPQDRPLH ETREGGFLQE IISATSTPQE LINNTNYQDT WQGNYSYFDE  240
FSLHEIEKVE NHQIDDIGSS IPIEQPWGVD NRRFIDIGDM EEVFMTGKTV ENLRGVGMSN  300
KELEKSMFEE HKVVPIENIS NFQRRNEQEN EGETSQHNFT DTDENDFSLG YVNDYQDGIL  360
GDEGDMAGTP TFELHEKVEV NHGMFIASRQ AAKTFFYQIE PSKIVKVKLN EVLSHNFSIT  420
KVKSYHSEIK NRPSFFDKFK TFAREKFRGV RKFSMDSKRG SSVLNQTRSR VILIISLLLT  480
TCIYLGEPCE SIRLQEDLSA TSKNMEDITE EDCSPYLKKV GEDKWNDDKM DSNISSRLTN  540
LGGGHISSVF LNKKWSFLAI ILALFSFGFQ KII*

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00212	DAP	Transfer from AT1G65910	Download

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010270697.1	0.0	PREDICTED: NAC domain-containing protein 45
TrEMBL	A0A2G5F7N4	0.0	A0A2G5F7N4_AQUCA; Uncharacterized protein
STRING	Aquca_002_01358.1	0.0	(Aquilegia coerulea)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65910.1	2e-64	NAC domain containing protein 28

Link Out ? help Back to Top
Phytozome	Aqcoe3G424500.2.p