PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe3G425500.1.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

G2-like

Protein Properties

Length: 315aa MW: 35369.4 Da PI: 7.2903

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe3G425500.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	104	9.2e-33	19	72	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtpeLH++Fv+a+e+LGG++kAtPk +l+lm+v gLt++hvkSHLQ+YR+ Aqcoe3G425500.1.p 19 PRLRWTPELHHCFVHAIERLGGQDKATPKLVLQLMDVRGLTISHVKSHLQMYRS 72 8****************************************************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	9.8E-32	15	75	IPR009057	Homeodomain-like
PROSITE profile	PS51294	12.384	15	75	IPR017930	Myb domain
SuperFamily	SSF46689	6.99E-16	17	74	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	6.6E-24	19	72	IPR006447	Myb domain, plants
Pfam	PF00249	8.6E-9	20	71	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 315 aa Download sequence Send to blast
MGSCGRSGSV RQYIRSKVPR LRWTPELHHC FVHAIERLGG QDKATPKLVL QLMDVRGLTI 60 SHVKSHLQMY RSMRSDLIRQ DSIQQSNHSF GYHDGCVDEE SSLGFFHSSN PMKDFHPHHP 120 LFSSLPLKRG RIETSSISHN LQCSERICET VSFPYCFDDY LHTDVDKREG IKEGLIRWQT 180 QQAQAPNTLF SLPHDTSCKL SAFPYSQESV FNKRPKRDEH QISSASKTRN LDNDHHLPTS 240 QSVENQTDEE EVGGCTLSLS LSLNPSSHKS NASSASELSE AFSSSSMINY SDYSRSSSQV 300 PKINLDLSIS LLGT*

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4k_A	4e-19	20	74	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B	4e-19	20	74	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A	4e-19	20	74	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C	4e-19	20	74	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D	4e-19	20	74	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F	4e-19	20	74	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H	4e-19	20	74	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J	4e-19	20	74	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_002281928.1	1e-110	PREDICTED: myb family transcription factor APL
TrEMBL	A0A2G5F7N3	0.0	A0A2G5F7N3_AQUCA; Uncharacterized protein
STRING	Aquca_002_01368.1	0.0	(Aquilegia coerulea)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G14600.1	1e-34	G2-like family protein

Link Out ? help Back to Top
Phytozome	Aqcoe3G425500.1.p