PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe4G007300.1.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

ZF-HD

Protein Properties

Length: 236aa MW: 26765.6 Da PI: 10.0719

Description

ZF-HD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe4G007300.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	ZF-HD_dimer	67.3	2.8e-21	17	72	3	60
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreveee 60 ++ YkeC++N+Aa+lG +a+DGC Ef+ + + + +++ C AC CHRn HR+ +++e Aqcoe4G007300.1.p 17 EFLYKECQQNQAARLGKYATDGCNEFILN--SARSETGMYCLACHCHRNSHRKVSVQE 72 678***********************8..344799**************98765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04770	1.0E-17	18	69	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PROSITE profile	PS51523	19.106	20	68	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain
TIGRFAMs	TIGR01566	1.7E-15	20	67	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain
ProDom	PD125774	2.0E-7	23	67	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain

Sequence ? help Back to Top
Protein Sequence Length: 236 aa Download sequence Send to blast
MEMGLRHEKK LLKEKVEFLY KECQQNQAAR LGKYATDGCN EFILNSARSE TGMYCLACHC 60 HRNSHRKVSV QEKDADFGAS GAEEKKRKSD DGTITIEILS GTTTKKRYRE EAETREDLHV 120 YSFRVHNLIA RGKLTIKLEK EIPQLIPKKE SPEKKEGDSR EESASSPRKK TRARRAIPKS 180 RKMPKSEWLM LAAAATEKQK KNACADRKMV TNGCLRSLPH DNSTKPSPLS TLPEF*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A2G5CFU9	4e-93	A0A2G5CFU9_AQUCA; Uncharacterized protein
STRING	Aquca_057_00118.1	7e-94	(Aquilegia coerulea)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G14687.1	3e-10	homeobox protein 32

Link Out ? help Back to Top
Phytozome	Aqcoe4G007300.1.p