PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe4G043700.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family Trihelix
Protein Properties Length: 259aa    MW: 29680 Da    PI: 10.0443
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe4G043700.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix42.91.3e-1325118186
           trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm........rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdq 84 
                        +W+++   +L+ea  +   +l+rg+l++++W++v++ +        r+++  r+ +qCk++++ l+kryk ++      +   ss++p+++ 
  Aqcoe4G043700.1.p  25 CWSEEDSYTLVEAWGDHYLELNRGNLRQKHWKQVADTVnfnaingtRKTPTPRTDIQCKNRIDTLKKRYKLERSKVLASNGSLSSNWPLYNL 116
                        7*********************************************************************888766555556677*****99 PP

           trihelix  85 le 86 
                        l+
  Aqcoe4G043700.1.p 117 LH 118
                        87 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.8E-42391IPR009057Homeodomain-like
PfamPF138373.5E-2123120No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    Send to blast
MNTPSIKTLT PLKRPSPLPT HREDCWSEED SYTLVEAWGD HYLELNRGNL RQKHWKQVAD  60
TVNFNAINGT RKTPTPRTDI QCKNRIDTLK KRYKLERSKV LASNGSLSSN WPLYNLLHAL  120
IGDFTTPKGA RKVKKSSKKA QFGALPLPTL PRQKGLDDFC TRRFGELRSS REEDGEEVDG  180
MRELAKAIMR FGEVYEKVEG EKQMQIIELE KQRMEFIKSM EFERMQLFMD TLVQVEKIKR  240
TKRAATAAVA ATATDNCN*
Functional Description ? help Back to Top
Source Description
UniProtTranscription regulator that may repress the maturation program during early embryogenesis. {ECO:0000269|PubMed:21330492}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010277022.13e-74PREDICTED: trihelix transcription factor ASIL2
SwissprotQ9LJG87e-28ASIL2_ARATH; Trihelix transcription factor ASIL2
TrEMBLA0A2G5CRX50.0A0A2G5CRX5_AQUCA; Uncharacterized protein
STRINGAquca_039_00151.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58630.15e-53sequence-specific DNA binding transcription factors