PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe4G062200.2.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bHLH
Protein Properties Length: 198aa    MW: 22356.4 Da    PI: 9.9586
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe4G062200.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.54.9e-132072155
                       CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
                HLH  1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                       ++ +hn  Er RR+++N+  ++L++llP+ +   + kKls  ++  ++ +YI +Lq
  Aqcoe4G062200.2.p 20 KKLNHNVSERDRRKKLNTLCSTLQSLLPNiD---NTKKLSIPSTICQVLKYIPQLQ 72
                       6789*************************88...8888*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474594.32E-161785IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.03E-101776No hitNo description
PROSITE profilePS5088814.2081971IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.4E-142086IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.4E-102072IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003536.1E-82577IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    Send to blast
NNLHSVNHSI SRTSSDPSTK KLNHNVSERD RRKKLNTLCS TLQSLLPNID NTKKLSIPST  60
ICQVLKYIPQ LQNQVARLKQ RKETLSSISK QSDSTHYTRQ SNVLGQSSLP TVSARRIDDS  120
QVVIHICTLK KNKSVFSEVL EIVERDNLHI LNASVITSSE NSLFYTLHVQ VNGTQRVECE  180
VLSENILSLF KKEEFFP*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_026417914.18e-58transcription factor ORG2-like
TrEMBLA0A2G5DX941e-115A0A2G5DX94_AQUCA; Uncharacterized protein
STRINGAquca_014_00599.11e-116(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.11e-43bHLH family protein