PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe4G062300.1.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

ZF-HD

Protein Properties

Length: 126aa MW: 13887.9 Da PI: 4.7275

Description

ZF-HD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe4G062300.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	ZF-HD_dimer	55.5	1.3e-17	15	63	5	56
ZF-HD_dimer 5 rYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRre 56 +++eC+kNh s+G + vDGC f+p+ ++ +++ C CgC R+FH e Aqcoe4G062300.1.p 15 VFRECKKNHTLSMGVYIVDGCMAFVPDY---SKENGMVCRGCGCYRSFHCIE 63 79**********************94...4569************765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04770	1.4E-15	15	61	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain
ProDom	PD125774	1.0E-7	16	60	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PROSITE profile	PS51523	16.295	16	63	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain

Sequence ? help Back to Top
Protein Sequence Length: 126 aa Download sequence Send to blast
MALNLSEENV GVVSVFRECK KNHTLSMGVY IVDGCMAFVP DYSKENGMVC RGCGCYRSFH 60 CIEVVKPAAL PQQQVGDLFH REEEVIKAVE NPQLLQSEEV IVPPADPQPP VAFFHREEVI 120 NPAAN*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G42780.1	3e-10	homeobox protein 27

Link Out ? help Back to Top
Phytozome	Aqcoe4G062300.1.p