PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe4G062500.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family ZF-HD
Protein Properties Length: 359aa    MW: 40265.4 Da    PI: 5.7748
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe4G062500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer65.78.8e-21960458
        ZF-HD_dimer  4 vrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58
                        +YkeC++Nh a++G h +DGC E++ +   ++ +    C AC CH+nFHR+  +
  Aqcoe4G062500.1.p  9 EVYKECQRNHGAEVGKHETDGCNEYILD---SSRSIPRYCEACSCHKNFHRKVLV 60
                       57*************************8...45578999*************865 PP
2ZF-HD_dimer72.66.3e-23137190358
        ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58 
                        +  YkeC++NhAa+lG ha+D C E++p+   ++ + ++ CaAC CH+nFHR+  +
  Aqcoe4G062500.1.p 137 TEIYKECQRNHAAELGKHATDNCNEYLPD--VSSWSLGMFCAACSCHKNFHRKVLV 190
                        568*************************8..5567999***************875 PP
3ZF-HD_dimer66.64.6e-21217269458
        ZF-HD_dimer   4 vrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58 
                         +YkeC++NhAa+lG ha+DGC E++p+   +  + ++ C AC  H+nFHR+  +
  Aqcoe4G062500.1.p 217 EVYKECQRNHAADLGKHATDGCNEYLPD--VSPWSLGMFCRACRWHKNFHRKVLV 269
                        68*************************8..444588999*************875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF047704.4E-171058IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PROSITE profilePS5152318.791158IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
ProDomPD1257743.0E-81157IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
TIGRFAMsTIGR015661.8E-151157IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PfamPF047702.7E-19139188IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
ProDomPD1257743.0E-10140187IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PROSITE profilePS5152320.969140188IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
TIGRFAMsTIGR015669.9E-18140187IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
ProDomPD1257744.0E-9210266IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PfamPF047704.9E-18218267IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PROSITE profilePS5152319.774219267IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
TIGRFAMsTIGR015664.0E-17219266IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
Sequence ? help Back to Top
Protein Sequence    Length: 359 aa     Download sequence    Send to blast
MEGENIITEV YKECQRNHGA EVGKHETDGC NEYILDSSRS IPRYCEACSC HKNFHRKVLV  60
PQKSNKAIND PGKEEGGGSE NKQPVLEKAI ESDLINEKQV GSISNREPEL SKDVNNFVVD  120
EADRLITTPQ SRPSQATEIY KECQRNHAAE LGKHATDNCN EYLPDVSSWS LGMFCAACSC  180
HKNFHRKVLV PEESNKADHE ADRPITPPQS NPSQITEVYK ECQRNHAADL GKHATDGCNE  240
YLPDVSPWSL GMFCRACRWH KNFHRKVLVP EEGAKVSQGD NNDKISGLVP GKSINPDQGK  300
EDVGGEKVTS VTKTEKRKAE YNTKLRAYNK KLAQGKNAED EDYYSDNEEN IDDYYSDK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50890.13e-14homeobox protein 28