PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe4G062900.1.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

ZF-HD

Protein Properties

Length: 129aa MW: 14218.8 Da PI: 4.0169

Description

ZF-HD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe4G062900.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	ZF-HD_dimer	37.5	5.7e-12	10	38	4	32
ZF-HD_dimer 4 vrYkeClkNhAaslGghavDGCgEfmpse 32 Yk C++NhAa+lG a+DGC E++ ++ Aqcoe4G062900.1.p 10 ELYKHCQRNHAAALGWIATDGCNEYIRNT 38 57***********************9874 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD125774	0.001	11	70	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain
Pfam	PF04770	1.1E-8	11	38	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PROSITE profile	PS51523	12.956	12	74	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain
Gene3D	G3DSA:1.10.8.10	8.4E-21	91	126	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 129 aa Download sequence Send to blast
MECREGSFTE LYKHCQRNHA AALGWIATDG CNEYIRNTAY PDVFERPTSD PCEDEGFELV 60 MADTGCGEQF KAPDLTIAED DEDVDETGMF PRDIDLVMTQ AGVSRAKAVK ALKAAEGDIV 120 DAIMELRY*

Functional Description ? help Back to Top
Source	Description
UniProt	May promote appropriate targeting of ribosome-nascent polypeptide complexes. {ECO:0000250}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_024186575.1	5e-29	nascent polypeptide-associated complex subunit alpha-like protein 1
Swissprot	Q9M612	5e-24	NACA_PINTA; Nascent polypeptide-associated complex subunit alpha-like protein
TrEMBL	A0A2G5CGZ9	2e-31	A0A2G5CGZ9_AQUCA; Uncharacterized protein
STRING	Aquca_055_00090.1	3e-32	(Aquilegia coerulea)

Link Out ? help Back to Top
Phytozome	Aqcoe4G062900.1.p