PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe4G083300.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family MYB_related
Protein Properties Length: 623aa    MW: 71114.7 Da    PI: 8.007
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe4G083300.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding33.21.2e-10444488347
                        SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
    Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                        rWT+ E+ l+v + +  G g Wk+Iar++  ++t+ q+ s+ qky
  Aqcoe4G083300.1.p 444 RWTEMEHRLFVWGLEDCGRGAWKSIARYFVRTKTPCQVASHAQKY 488
                        9*******************************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF525403.42E-37149346IPR027417P-loop containing nucleoside triphosphate hydrolase
Gene3DG3DSA:3.40.50.3003.2E-16166300IPR027417P-loop containing nucleoside triphosphate hydrolase
PfamPF009311.9E-36168346IPR002182NB-ARC
PRINTSPR003643.5E-9183198No hitNo description
PRINTSPR003643.5E-9256270No hitNo description
SMARTSM007170.0055346398IPR001005SANT/Myb domain
CDDcd001672.15E-4350396No hitNo description
Gene3DG3DSA:1.10.10.609.0E-4371396IPR009057Homeodomain-like
SuperFamilySSF466891.87E-14438493IPR009057Homeodomain-like
TIGRFAMsTIGR015572.0E-13440491IPR006447Myb domain, plants
PROSITE profilePS512939.28440493IPR017884SANT domain
Gene3DG3DSA:1.10.10.609.8E-6440496IPR009057Homeodomain-like
SMARTSM007173.8E-5441491IPR001005SANT/Myb domain
PfamPF002492.4E-7444488IPR001005SANT/Myb domain
CDDcd001671.80E-5444489No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
GO:0043531Molecular FunctionADP binding
Sequence ? help Back to Top
Protein Sequence    Length: 623 aa     Download sequence    Send to blast
MALEILAIVV TPINDIGKCL FGALKQQIRY LTSYNTNIQN LRSQVSELKL TREGVQTRVE  60
AALRNLEEPF RNVQNWLEDT TEEKLDEQLR DFDEANINKK CFKGLCPDLS SRLRLSKQAV  120
RMTETFHTLQ EKVNDFLVTG ITHLRPPPNI ELVRRPTIVA NILPRDSLMN DLMKALKDSN  180
IRSIGVHGMG GIGKTTLVEK INNELAGHIL FNKVIMVIVS KDPDLRRIQE DIAQRLGLNL  240
QATSTNIRAN RLFERLEAEE KVLIILDDVW KTLKVEDIGL PGGCKLIVTT RMQKVCVQMK  300
LQKIIKVEPL SEVESWVLFE SKAGGVVTLP NLEPIAQNIV EKCKGSWKLW TEEEKKQFDV  360
LIADMDLYSM DLFETIASQI PGKTADQVEE QFHSLILKLD ISSNGSVSDR GKNVVSNNEV  420
ESFKHPIRGR RPAPNNISQK HYVRWTEMEH RLFVWGLEDC GRGAWKSIAR YFVRTKTPCQ  480
VASHAQKYFM RRNNRESYVG RRYSILDIHT FDQSLGPKSI FAHYKPLPPY PVPPSPPIYP  540
PPEYYNIFPG SSKVRNKYPS ASLYPTKEYY NFPQHVTNPL VGPPMNNDNE EGTSMSFPES  600
PSNYLLDEPL LDDYLDFASF IQ*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j5t_C6e-122434517357Disease resistance RPP13-like protein 4
6j5t_F6e-122434517357Disease resistance RPP13-like protein 4
6j5t_G6e-122434517357Disease resistance RPP13-like protein 4
6j5t_L6e-122434517357Disease resistance RPP13-like protein 4
6j5t_O6e-122434517357Disease resistance RPP13-like protein 4
6j5u_A6e-122434517357Disease resistance RPP13-like protein 4
6j5v_A6e-122434517357Disease resistance RPP13-like protein 4
6j5w_A6e-122434517357Disease resistance RPP13-like protein 4
6j6i_C6e-122434517357Disease resistance RPP13-like protein 4
6j6i_F6e-122434517357Disease resistance RPP13-like protein 4
6j6i_G6e-122434517357Disease resistance RPP13-like protein 4
6j6i_L6e-122434517357Disease resistance RPP13-like protein 4
6j6i_O6e-122434517357Disease resistance RPP13-like protein 4
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5C2M50.0A0A2G5C2M5_AQUCA; Uncharacterized protein
STRINGAquca_112_00010.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08520.11e-24MYB family protein