PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe4G083300.2.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

MYB_related

Protein Properties

Length: 259aa MW: 29749.5 Da PI: 7.7087

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe4G083300.2.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	34.9	3.5e-11	80	124	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rWT+ E+ l+v + + G g Wk+Iar++ ++t+ q+ s+ qky Aqcoe4G083300.2.p 80 RWTEMEHRLFVWGLEDCGRGAWKSIARYFVRTKTPCQVASHAQKY 124 9*******************************************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51293	7.223	1	40	IPR017884	SANT domain
Gene3D	G3DSA:1.10.10.60	4.6E-4	7	32	IPR009057	Homeodomain-like
SuperFamily	SSF46689	4.79E-15	74	129	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	5.5E-14	76	127	IPR006447	Myb domain, plants
Gene3D	G3DSA:1.10.10.60	2.6E-6	76	132	IPR009057	Homeodomain-like
PROSITE profile	PS51293	9.28	76	129	IPR017884	SANT domain
SMART	SM00717	3.8E-5	77	127	IPR001005	SANT/Myb domain
Pfam	PF00249	6.9E-8	80	124	IPR001005	SANT/Myb domain
CDD	cd00167	1.43E-6	80	125	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding
GO:0043531	Molecular Function	ADP binding

Sequence ? help Back to Top
Protein Sequence Length: 259 aa Download sequence Send to blast
MDLYSMDLFE TIASQIPGKT ADQVEEQFHS LILKLDISSN GSVSDRGKNV VSNNEVESFK 60 HPIRGRRPAP NNISQKHYVR WTEMEHRLFV WGLEDCGRGA WKSIARYFVR TKTPCQVASH 120 AQKYFMRRNN RESYVGRRYS ILDIHTFDQS LGPKSIFAHY KPLPPYPVPP SPPIYPPPEY 180 YNIFPGSSKV RNKYPSASLY PTKEYYNFPQ HVTNPLVGPP MNNDNEEGTS MSFPESPSNY 240 LLDEPLLDDY LDFASFIQ*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A2G5DSX5	1e-126	A0A2G5DSX5_AQUCA; Uncharacterized protein
STRING	Aquca_015_00278.1	1e-127	(Aquilegia coerulea)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08520.1	8e-24	MYB family protein

Link Out ? help Back to Top
Phytozome	Aqcoe4G083300.2.p