PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe4G093600.1.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

Dof

Protein Properties

Length: 314aa MW: 35072.9 Da PI: 8.7978

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe4G093600.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	53	7e-17	26	82	5	61
zf-Dof 5 alkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++cprC+s +t f yy y +qPr Ck C yWt+ r + +G+ r+ n++s Aqcoe4G093600.1.p 26 RRRCPRCNSLETMFGYYSIYRDNQPRNHCKICSHYWTQEEMPRGISIGSKRKTNQHS 82 578*********************************************999988876 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50884	16.926	27	81	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	8.9E-14	27	81	IPR003851	Zinc finger, Dof-type
ProDom	PD007478	2.0E-6	33	80	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 314 aa Download sequence Send to blast
MEKQGMGAME DQQQRQQLVE VQPCPRRRCP RCNSLETMFG YYSIYRDNQP RNHCKICSHY 60 WTQEEMPRGI SIGSKRKTNQ HSDAASSSTN RVCKIPRSVE NVFQTSGSDV RINRRDPVSR 120 ILAAEGNAPS NPSPFMRINE PRTLHASLRA PVTQSATIAT GSGLWAAILG GQSANQLLSG 180 LSGGVNQHLY PHSLHEQPQQ QQEQQHLYNS QNSWEGNTLV MRSTNVWQFQ PRLYNIGSVS 240 NPEALLWSNN NNIGQLRSQG TPFPHSTGVP DFQDFYNNVG RASDPEANLF NNNSNGIGGL 300 PVNPLFWPDN PKF*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A2G5D078	0.0	A0A2G5D078_AQUCA; Uncharacterized protein
STRING	Aquca_033_00060.1	0.0	(Aquilegia coerulea)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G62430.1	3e-09	cycling DOF factor 1

Link Out ? help Back to Top
Phytozome	Aqcoe4G093600.1.p