PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe4G109800.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family G2-like
Protein Properties Length: 226aa    MW: 25667.3 Da    PI: 9.4593
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe4G109800.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like68.88.9e-222070152
            G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQk 52
                       kpr +Wt e+H++F+ av++L G ekA+P++i+e mkv+gLt+e+ +SHLQk
  Aqcoe4G109800.1.p 20 KPRFNWTREMHAKFITAVNEL-GFEKAVPSKIVEKMKVDGLTREQAASHLQK 70
                       79*******************.9****************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.7E-211771IPR009057Homeodomain-like
SuperFamilySSF466895.82E-151773IPR009057Homeodomain-like
PROSITE profilePS5129410.041776IPR017930Myb domain
TIGRFAMsTIGR015572.8E-192071IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    Send to blast
MKRGRGDDNT RVDESTTRKK PRFNWTREMH AKFITAVNEL GFEKAVPSKI VEKMKVDGLT  60
REQAASHLQK LEWFEKEQRI SNFNMDGMIN LDQPIQRPKT FCNSLLTPNF LPHSIAQPSN  120
LPYRYPQAIQ ALHPNNQRIQ VPMFGNMPPN SMNMGNLQPQ LCPIYPTYPP RTISGNYNVG  180
NGHSSEFSDM LCRELPNGAI IPIEMNAISQ TNLQAVDNVF PRSLL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1irz_A4e-171671156ARR10-B
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58080.11e-19response regulator 18