PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe4G131000.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family CPP
Protein Properties Length: 76aa    MW: 8696.3 Da    PI: 4.7909
Description CPP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe4G131000.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCR27.46.7e-0923461841
                TCR 18 CeCfaagkkCseeCkCedCkNkee 41
                       C Cfa gk+C+e C C++C+N+ +
  Aqcoe4G131000.1.p 23 CGCFAVGKYCAEPCACQECFNNPQ 46
                       *********************976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036384.9E-62244IPR005172CRC domain
Sequence ? help Back to Top
Protein Sequence    Length: 76 aa     Download sequence    Send to blast
MFFFLPIYFH LEKGFYFLLW LICGCFAVGK YCAEPCACQE CFNNPQYEDK VLQARIVNWG  60
LIQLELGISF SVIGV*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04850.12e-12Tesmin/TSO1-like CXC domain-containing protein