PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe4G132100.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family NAC
Protein Properties Length: 231aa    MW: 27163.2 Da    PI: 8.7622
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe4G132100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM88.31.4e-27131421128
                NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 
                        lppG+rF+P+ +el+++yL kk+ g+++   evi + d+y +  Pw+L +   ++++e+y+F+  +kk+   k+  r+tk+g+Wk   ++k+
  Aqcoe4G132100.1.p  13 LPPGYRFRPSPQELIQYYLYKKLVGEEILP-EVIVNKDLYGTaAPWELLEG-CSKDEELYYFTLVKKKHG-RKNIDRVTKDGTWKME-NTKP 100
                        79*************************877.799999*998768****743.46789*******999876.578999********76.5699 PP

                NAM  92 vlskkgelvglkktLvfy.....kgrapkgektdWvmheyrl 128
                        v + +g+++g k+tL++        +++ g++ +W+mhey++
  Aqcoe4G132100.1.p 101 VNDCNGKVIGYKTTLTLIvdenkFDKNQVGKQWNWIMHEYSM 142
                        *999**************8865435888899*********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019418.37E-312157IPR003441NAC domain
PROSITE profilePS5100529.42713160IPR003441NAC domain
PfamPF023653.3E-1714141IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    Send to blast
MMNMQLHPVG LGLPPGYRFR PSPQELIQYY LYKKLVGEEI LPEVIVNKDL YGTAAPWELL  60
EGCSKDEELY YFTLVKKKHG RKNIDRVTKD GTWKMENTKP VNDCNGKVIG YKTTLTLIVD  120
ENKFDKNQVG KQWNWIMHEY SMKDANNGNE YWVVSGVKRA SSKISVEFID IVDDYVMKDV  180
DSSKVCWGLY NYSSLINNFK DSMWENKMRD SCHYSNMMMI NFKRVRDNKM R
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A7e-141114213140Stress-induced transcription factor NAC1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5CRZ76e-80A0A2G5CRZ7_AQUCA; Uncharacterized protein
STRINGAquca_039_00159.11e-80(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G46590.11e-19NAC domain containing protein 96