PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe4G144000.1.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

Dof

Protein Properties

Length: 282aa MW: 31599.3 Da PI: 9.3915

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe4G144000.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	114	6.5e-36	49	103	5	59
zf-Dof 5 alkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknk 59 lkcprC+stntkfCyynny+ sqPr+fCk+Crr+WtkGG+lrnvPvGggr++++ Aqcoe4G144000.1.p 49 PLKCPRCESTNTKFCYYNNYNRSQPRHFCKSCRRHWTKGGTLRNVPVGGGRKNKR 103 689**********************************************976665 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF02701	1.6E-31	50	102	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	27.698	50	104	IPR003851	Zinc finger, Dof-type
ProDom	PD007478	9.0E-23	50	103	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	52	88	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 282 aa Download sequence Send to blast
MGLSSKQVSG EGFDWAKNIM QAGALELPNI VTPVRQQQQQ QQQQQSVPPL KCPRCESTNT 60 KFCYYNNYNR SQPRHFCKSC RRHWTKGGTL RNVPVGGGRK NKRLKTSHSS STNTTNKDIN 120 TSQGSKITKG SIQSQEQVHQ QQLPLEYNDQ KKFSEILYQS LLQPTSSLLP TSHHLDYINN 180 NLLVSTLPMD SLLPLPNHPS TTLSSFSTNP SSMLSSFDAR FQFPNVLNYT DEGKPSDNLT 240 TITTTTATTM TPPVQWQVPA ATNGVMDSPN FWNWEDLNTF N*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_002268276.2	6e-69	PREDICTED: dof zinc finger protein DOF1.1
TrEMBL	A0A2G5C9B6	0.0	A0A2G5C9B6_AQUCA; Uncharacterized protein
STRING	Aquca_078_00053.1	0.0	(Aquilegia coerulea)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60200.1	5e-29	TARGET OF MONOPTEROS 6

Link Out ? help Back to Top
Phytozome	Aqcoe4G144000.1.p