PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe4G178500.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family ARR-B
Protein Properties Length: 641aa    MW: 71743.8 Da    PI: 5.882
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe4G178500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like62.86.5e-20228284156
            G2-like   1 kprlrWtpeLHerFveaveqLG.GsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                        k+r++Wt +LHe+F++a+++L   +++ +P++i  lmkv gL++++++SHLQkYR++
  Aqcoe4G178500.1.p 228 KTRVVWTAQLHEKFLQALSKLNmANKRVIPRRIHALMKVRGLSRSNIASHLQKYRMH 284
                        68*******************82456789**************************96 PP
2Response_reg70.76.2e-24201241105
                        EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHH CS
       Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedaleal 90 
                        vl+vdD+p+ + + +++l+ ++y +v++a+ g+eal  lk+++  +Dl+l D+ mpgmdG++ll+  r+   ++p +++++  + + +++ l
  Aqcoe4G178500.1.p  20 VLVVDDDPSSLLIAERMLTTKHY-NVTTATGGREALSFLKNSEddFDLVLSDLHMPGMDGFQLLTIVRTLY-DIPFLFMSSDHKLDVMERGL 109
                        89*********************.***************888778********************999999.******************** PP

                        HTTESEEEESS--HH CS
       Response_reg  91 kaGakdflsKpfdpe 105
                        +aGa+ f++Kp  ++
  Aqcoe4G178500.1.p 110 EAGARFFFTKPLTIS 124
                        ***********9876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.40.50.23005.5E-3117139No hitNo description
SuperFamilySSF521721.57E-3018124IPR011006CheY-like superfamily
SMARTSM004482.7E-2518130IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011036.87719134IPR001789Signal transduction response regulator, receiver domain
PfamPF000724.5E-2120124IPR001789Signal transduction response regulator, receiver domain
CDDcd001561.10E-2721120No hitNo description
SuperFamilySSF466896.45E-15226287IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.8E-19227287IPR009057Homeodomain-like
TIGRFAMsTIGR015575.6E-20228284IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 641 aa     Download sequence    Send to blast
MASIAIENPQ NRNMRVGLHV LVVDDDPSSL LIAERMLTTK HYNVTTATGG REALSFLKNS  60
EDDFDLVLSD LHMPGMDGFQ LLTIVRTLYD IPFLFMSSDH KLDVMERGLE AGARFFFTKP  120
LTISNYENMW QFVYTENLEY FKAINIEGGQ GLPPPPPTSS QDRSSSLSIS DDICRQSRNS  180
SSSSNTSNVK KRRQDNGQDN KKQKRHYKNR GNEDQDFGKK TAVVPLKKTR VVWTAQLHEK  240
FLQALSKLNM ANKRVIPRRI HALMKVRGLS RSNIASHLQK YRMHLNKYKG TPESDYPRSS  300
RIRMRLPNET KYHDYSPSRD HSMRYNSYNY QNRQQIPLTA NQPKLPDNCC PPSNINHVPS  360
ARPQYHFQEG SNDNSISQDN YGHPTAITNS GYLGQTWVGG APTVNQSNGG MYPTLFGTSA  420
PLYGNDLNIG STTNPTPIMA DQNVTQGNTG FPSNEPLEPN IDNLSFESLQ GSPPSVDIGN  480
MGLFGAWNGI LTRTMGGGIP NNDNSAEIGR MDEIQKADDI FSFLDDPLYF DGMNPKITSL  540
DEPFVVNSNV TSLDEPFVVN SNYDVVGESS TMALVNPNKL QLGNEDNNNG LFNFVNDDIE  600
KFLLNQGYEN ANQQEGGGYL DPDFDPFEFL QHGDNNSRVI *
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5DAW40.0A0A2G5DAW4_AQUCA; Uncharacterized protein
STRINGAquca_024_00004.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.11e-43response regulator 2