PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe4G180000.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family ARR-B
Protein Properties Length: 269aa    MW: 30893.9 Da    PI: 10.6224
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe4G180000.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like50.64.3e-16214263151
            G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 
                        k+r+ Wt++LHe+F+ a++ L  + + +Pk+i  lmk+  L++++++SHLQ
  Aqcoe4G180000.1.p 214 KTRVIWTSQLHEKFLLALRIL-SKARVVPKRIQALMKIRELSRANIASHLQ 263
                        68*******************.999************************** PP
2Response_reg44.58.5e-163211225104
                        EEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESEEEESS--H CS
       Response_reg  25 evaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGakdflsKpfdp 104
                        +v++a+  +eal llk++d  +Dl+l  + +pgmdG++ll+  r+   ++p i++++  + + +++ l+aGa+ f+ Kp  +
  Aqcoe4G180000.1.p  32 SVTTATGCREALSLLKNSDvhFDLVLSELYLPGMDGYQLLEIVRTVY-NIPFIFMSSDHTLDVMERGLEAGARFFFLKPLTM 112
                        7999***************99********************999988.*******************************876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5011021.3488123IPR001789Signal transduction response regulator, receiver domain
SMARTSM004484.9E-710119IPR001789Signal transduction response regulator, receiver domain
CDDcd001561.65E-1623112No hitNo description
Gene3DG3DSA:3.40.50.23001.8E-1831128No hitNo description
SuperFamilySSF521722.13E-1931113IPR011006CheY-like superfamily
PfamPF000721.3E-1232113IPR001789Signal transduction response regulator, receiver domain
SuperFamilySSF466896.45E-12212265IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.607.1E-15213263IPR009057Homeodomain-like
TIGRFAMsTIGR015579.7E-18214265IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    Send to blast
MAKLVTWRSI HVGIDIVLII IPRLIINFIL LSVTTATGCR EALSLLKNSD VHFDLVLSEL  60
YLPGMDGYQL LEIVRTVYNI PFIFMSSDHT LDVMERGLEA GARFFFLKPL TMSNYESMWQ  120
FVYTENIEYF RAMNIERRQG PSPPPQDRPS SLSISDYTTR KQGRNSSSSS NTSNRKKQRQ  180
DDGQDNKKQK RPYKKRGKED QNFGKNIAAV PPKKTRVIWT SQLHEKFLLA LRILSKARVV  240
PKRIQALMKI RELSRANIAS HLQVCLIH*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5DAW41e-164A0A2G5DAW4_AQUCA; Uncharacterized protein
STRINGAquca_024_00004.11e-165(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.12e-27response regulator 2