PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe4G188300.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family GeBP
Protein Properties Length: 213aa    MW: 24748.5 Da    PI: 9.8273
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe4G188300.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57370.92.6e-2222122297
             DUF573   2 lfqrlwseeDeivlLqGlidfkaktgk...spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksg.kep.sfskehdqki 88 
                         f++lws+ De+vlL+G+i+fk+kt++   +++   + +++ ++ks+s++++ +q+  K r+L++K+   v++++sg k+p + ++ h+++ 
  Aqcoe4G188300.1.p  22 PFEKLWSDADELVLLKGMIEFKTKTNSafiDSTPKFETLHKSIEKSLSIEFTIKQVQGKFRKLRDKYFSVVERVRSGvKDPfHGKSLHEKHL 113
                        5899*********************99777777789999**********************************666514441446779**** PP

             DUF573  89 felskkiWg 97 
                        ++ls+ +Wg
  Aqcoe4G188300.1.p 114 YQLSENFWG 122
                        ********8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045041.2E-1923122IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    Send to blast
MNQVEKNAAQ PKPITGSSSK NPFEKLWSDA DELVLLKGMI EFKTKTNSAF IDSTPKFETL  60
HKSIEKSLSI EFTIKQVQGK FRKLRDKYFS VVERVRSGVK DPFHGKSLHE KHLYQLSENF  120
WGDFKVKESK HPNVSLDVTE FFYLEQFWKG NNATLPPGLV RNKQWEECIG RDNAVSLNLK  180
AKELIIDEME IYLRRLELIK ETTHLKLDFL KK*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5CJ901e-155A0A2G5CJ90_AQUCA; Uncharacterized protein
STRINGAquca_050_00014.11e-155(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61730.14e-12DNA-binding storekeeper protein-related transcriptional regulator