PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe4G219400.1.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

FAR1

Protein Properties

Length: 165aa MW: 19568.3 Da PI: 4.8422

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe4G219400.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	36.5	1.6e-11	67	133	2	69
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvk 69 fYneYAk GFsvrk+ k + ng ++r+f Cs+ kr+e+ + ++++r+++ t +C +l v Aqcoe4G219400.1.p 67 FYNEYAKLKGFSVRKDMLKVK--NGIRIRRRFICSCADKRREKWINmSNRRRNPHRLTIFDCLSMLIVY 133 9*************98887..9999*********999877567788889999999999875 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	7.5E-10	67	133	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 165 aa Download sequence Send to blast
MDSIDDYAEV NNDSDSEDGN ERKSFDVNIL LDIGLRFEEE IDEDLDDFSE AYILEEQFET 60 EVEAYLFYNE YAKLKGFSVR KDMLKVKNGI RIRRRFICSC ADKRREKWIN MSNRRRNPHR 120 LTIFDCLSML IVYCLSMLHL KMIVYVVNIR LKLVVQNETT ISNR*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A2G5D460	1e-30	A0A2G5D460_AQUCA; Uncharacterized protein
STRING	Aquca_028_00159.1	2e-31	(Aquilegia coerulea)

Link Out ? help Back to Top
Phytozome	Aqcoe4G219400.1.p