PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe4G270700.1.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

FAR1

Protein Properties

Length: 668aa MW: 76868.6 Da PI: 8.9402

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe4G270700.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	59.4	1.1e-18	62	156	1	90
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkk...tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnH 87 +fY+eY+++ GFs+r+++ ++ + +++it+ +vCs+eg +++++ k + + r++++ r++Cka+++++k+k ++ +evt +e+ H+H Aqcoe4G270700.1.p 62 NFYREYGRKEGFSTRTRTIDRKqHGSNTITSCLLVCSREGVHNRREVKfggISGKPRNTSTVRCECKASMRLTKRKfEESYEVTMVENTHSH 153 6************999877735677899999*******9999999888999999************9************* PP FAR1 88 ela 90 l+ Aqcoe4G270700.1.p 154 GLV 156 997 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	2.6E-15	62	156	IPR004330	FAR1 DNA binding domain
Pfam	PF10551	2.4E-31	253	346	IPR018289	MULE transposase domain

Sequence ? help Back to Top
Protein Sequence Length: 668 aa Download sequence Send to blast
MDLSKDDDVN NLEPIDLSGD DGEPNRCANI GSPSNETPKK DTSKAETPHL GMTFKTVDDA 60 KNFYREYGRK EGFSTRTRTI DRKQHGSNTI TSCLLVCSRE GVHNRREVKF GGISGKPRNT 120 STVRCECKAS MRLTKRKFEE SYEVTMVENT HSHGLVSPCK RMNMRGLPVA KVASVFCGDT 180 IGFTAKDCHN HCGSTRKKPK DGDATAILHY FEKMSAEDPQ FYYAIQSDAK GRAVNFFWVD 240 GRSRMQYEYF GDVVSFDTTY RTNAYKIPFA PFTGVNHHLM SIQFGCGLLL DETEGTFVWL 300 FKTWLAAMGG RPPTSMITDQ DKAMTSAVAR VFLNTRHRHC LWHITNKFPE KLAHVMHVNE 360 KFSEELKLII SGSYRTYDFE RKWNEHMVKY KLVDQSWLKS IYEARRTWVP AYHLDTFFAG 420 MNTTGRSESM NSYYDMFLKP TTTLSDFVYS IDKLLRLIIK NERDFDYRTE HSSRIVGKDD 480 FLLKHAGKVY TLNAFGKFKS QWDKAKGVYK IDKECKYFSF MGLPCGHLLK VFWRHDIDQI 540 PDHFIMRRWT QKANTYRAMF EGGLVNGHET SEALILTHGC RLATQLAFDA STHDEMYKYL 600 VEKFDELSIE IAKRKKTLNK SVNSEMASHQ VSEELSIVDP SHVFINICKV WKEFGKVVFK 660 FILTPNT*

Sequence ? help Back to Top

Protein Sequence Length: 668 aa Download sequence Send to blast

MDLSKDDDVN NLEPIDLSGD DGEPNRCANI GSPSNETPKK DTSKAETPHL GMTFKTVDDA  60
KNFYREYGRK EGFSTRTRTI DRKQHGSNTI TSCLLVCSRE GVHNRREVKF GGISGKPRNT  120
STVRCECKAS MRLTKRKFEE SYEVTMVENT HSHGLVSPCK RMNMRGLPVA KVASVFCGDT  180
IGFTAKDCHN HCGSTRKKPK DGDATAILHY FEKMSAEDPQ FYYAIQSDAK GRAVNFFWVD  240
GRSRMQYEYF GDVVSFDTTY RTNAYKIPFA PFTGVNHHLM SIQFGCGLLL DETEGTFVWL  300
FKTWLAAMGG RPPTSMITDQ DKAMTSAVAR VFLNTRHRHC LWHITNKFPE KLAHVMHVNE  360
KFSEELKLII SGSYRTYDFE RKWNEHMVKY KLVDQSWLKS IYEARRTWVP AYHLDTFFAG  420
MNTTGRSESM NSYYDMFLKP TTTLSDFVYS IDKLLRLIIK NERDFDYRTE HSSRIVGKDD  480
FLLKHAGKVY TLNAFGKFKS QWDKAKGVYK IDKECKYFSF MGLPCGHLLK VFWRHDIDQI  540
PDHFIMRRWT QKANTYRAMF EGGLVNGHET SEALILTHGC RLATQLAFDA STHDEMYKYL  600
VEKFDELSIE IAKRKKTLNK SVNSEMASHQ VSEELSIVDP SHVFINICKV WKEFGKVVFK  660
FILTPNT*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A251PRW6	0.0	A0A251PRW6_PRUPE; Uncharacterized protein
TrEMBL	M5X3A3	0.0	M5X3A3_PRUPE; Uncharacterized protein
STRING	EMJ13570	0.0	(Prunus persica)
STRING	EMJ22296	0.0	(Prunus persica)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-108	FAR1-related sequence 5

Link Out ? help Back to Top
Phytozome	Aqcoe4G270700.1.p