PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe4G284500.2.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family MYB_related
Protein Properties Length: 308aa    MW: 33911.5 Da    PI: 4.2848
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe4G284500.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding57.14.2e-18247148
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
    Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                       rg+ T eE++++++ +++ G++ W+ Iar+++ gRt++++k++w++yl
  Aqcoe4G284500.2.p  2 RGNITSEEEDIIIKMHNKIGNR-WSVIARHLP-GRTDNEIKNHWNSYL 47
                       7999******************.*********.*************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007179.0E-16149IPR001005SANT/Myb domain
PROSITE profilePS5129424.671151IPR017930Myb domain
PfamPF002491.1E-15247IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.603.2E-21347IPR009057Homeodomain-like
SuperFamilySSF466894.21E-14452IPR009057Homeodomain-like
CDDcd001671.62E-12647No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    Send to blast
MRGNITSEEE DIIIKMHNKI GNRWSVIARH LPGRTDNEIK NHWNSYLSRR IYTIRRPVGE  60
SSPRTVIDTV KLDGGCKRKG QPRCRVSRKK NNHQEIPSNA EKGFIEKSFI EGGLIPSMTL  120
NKDDKESQNA GIILNLSEEI ETMSWSSSVV NGEPENEIMG PYQGLESCVL FTDDIMDEDL  180
LNPSDILSLN EKDNEGQLGV LLGSSSNNNG DEGESSGGVS LSSNSTAADP AESTDEWYVP  240
FCSIAHPGER EGVVEAPDNN ILITDKLGDD QLLSWLWDIN DSSTKEGDLF LDCDEEQIKA  300
IAGSLLS*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5D4100.0A0A2G5D410_AQUCA; Uncharacterized protein
STRINGAquca_028_00141.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49330.12e-23myb domain protein 111