PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe4G287100.1.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

G2-like

Protein Properties

Length: 346aa MW: 38647.4 Da PI: 8.5838

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe4G287100.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	92.6	3.3e-29	217	271	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+rWt++LHerFve+v+ LGG++kAtPk il+lm+ +gLt +vkSHLQk+R+ Aqcoe4G287100.1.p 217 KTRIRWTQDLHERFVECVNCLGGADKATPKGILKLMDSDGLTTFQVKSHLQKHRM 271 68****************************************************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF46689	4.3E-17	215	271	IPR009057	Homeodomain-like
Gene3D	G3DSA:1.10.10.60	2.2E-26	216	272	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	9.8E-22	217	271	IPR006447	Myb domain, plants
Pfam	PF00249	2.2E-6	221	270	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 346 aa Download sequence Send to blast
MNTQKIRCYP FEFSGCSTYT DNSHPWQPWN MGVCCQSSLS ASQADLQLSN LCSANSFKVG 60 SDHLESETSV FNTAEHYYQL GTPMFSQLTD KSSYTDISSR DTLQSIVRYS LPSNQNPRPS 120 ENSYRTCTSL LGSEHSSPWQ NNKLVIDNAA LKRKNPSNSS DESHNTRIAY NPFTSELDQP 180 SIHLTPDKNK QSTQTSCGVI SYTSASPVST RTAPLSKTRI RWTQDLHERF VECVNCLGGA 240 DKATPKGILK LMDSDGLTTF QVKSHLQKHR MAKYIPESAE GKSDKKVPTS DTIKLDPKAY 300 TTVSLFLFLL YIDTSQIKNC IQLTIISYKL NMTVAFKSRR LCGYS*

Sequence ? help Back to Top

Protein Sequence Length: 346 aa Download sequence Send to blast

MNTQKIRCYP FEFSGCSTYT DNSHPWQPWN MGVCCQSSLS ASQADLQLSN LCSANSFKVG  60
SDHLESETSV FNTAEHYYQL GTPMFSQLTD KSSYTDISSR DTLQSIVRYS LPSNQNPRPS  120
ENSYRTCTSL LGSEHSSPWQ NNKLVIDNAA LKRKNPSNSS DESHNTRIAY NPFTSELDQP  180
SIHLTPDKNK QSTQTSCGVI SYTSASPVST RTAPLSKTRI RWTQDLHERF VECVNCLGGA  240
DKATPKGILK LMDSDGLTTF QVKSHLQKHR MAKYIPESAE GKSDKKVPTS DTIKLDPKAY  300
TTVSLFLFLL YIDTSQIKNC IQLTIISYKL NMTVAFKSRR LCGYS*

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4k_A	2e-21	217	274	2	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B	2e-21	217	274	2	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A	2e-21	217	274	1	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	2e-21	217	274	1	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	2e-21	217	274	1	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	2e-21	217	274	1	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A	2e-21	217	274	2	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C	2e-21	217	274	2	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D	2e-21	217	274	2	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F	2e-21	217	274	2	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H	2e-21	217	274	2	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J	2e-21	217	274	2	59	Protein PHOSPHATE STARVATION RESPONSE 1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A2G5D406	1e-178	A0A2G5D406_AQUCA; Uncharacterized protein
STRING	Aquca_028_00122.1	1e-179	(Aquilegia coerulea)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06800.2	1e-36	G2-like family protein

Link Out ? help Back to Top
Phytozome	Aqcoe4G287100.1.p