PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe5G002400.2.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family ERF
Protein Properties Length: 193aa    MW: 22127.7 Da    PI: 8.6915
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe5G002400.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP231.54.4e-1067108351
                AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                         +GV++  k+ +W A I++      +k+++lg+ g+  eAa ++++a+ 
  Aqcoe5G002400.2.p  67 MRGVYF--KNMKWQAAIKVD-----KKQIHLGTVGSQVEAAHLYDRAAF 108
                        79**98..47*********4.....5**********99********985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003807.2E-466123IPR001471AP2/ERF domain
SuperFamilySSF541715.23E-766111IPR016177DNA-binding domain
PfamPF008472.4E-466109IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.5E-569113IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    Send to blast
MSVHPVSSVE LNQPKENNLS IVPPVSSNIS GTSSSKEERS QNFSEQAVKR RKRHRRKHFE  60
NQEPCIMRGV YFKNMKWQAA IKVDKKQIHL GTVGSQVEAA HLYDRAAFMC GREPNFELSE  120
EEKQELRQYD WNEFLTMTRY AITNKKHQKR LRAGPTNQHE TPLQNGKSDK EQGTQSVSDL  180
EDVEVEPETS VS*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankFQ3931483e-42FQ393148.1 Vitis vinifera clone SS0AFA2YG23.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010242670.16e-79PREDICTED: ethylene-responsive transcription factor-like protein At4g13040 isoform X2
RefseqXP_019051495.16e-79PREDICTED: ethylene-responsive transcription factor-like protein At4g13040 isoform X2
RefseqXP_019051496.16e-79PREDICTED: ethylene-responsive transcription factor-like protein At4g13040 isoform X2
TrEMBLA0A2G5C3A51e-142A0A2G5C3A5_AQUCA; Uncharacterized protein
STRINGAquca_108_00037.11e-142(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.12e-47ERF family protein