PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe5G024200.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family NAC
Protein Properties Length: 270aa    MW: 30831.8 Da    PI: 5.7108
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe5G024200.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM161.14.4e-50101381129
                NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                        lppGfrF P+deelv++yL +k++++k++   ++ evd++++ePw+Lp  +k + ++wyfFs r++kya g r+nrat sgyWkatgkd+++
  Aqcoe5G024200.1.p  10 LPPGFRFYPSDEELVCHYLYRKITNEKVSK-GTMVEVDLHTCEPWQLPDVAKLGANDWYFFSFRERKYAIGLRTNRATVSGYWKATGKDRPI 100
                        79*************************988.88***************87788999************************************ PP

                NAM  93 lsk.kgelvglkktLvfykgrapkgektdWvmheyrle 129
                        +s+ ++e vg++ktLvfy+ rap+g kt W+mhe+rle
  Aqcoe5G024200.1.p 101 FSSvTREIVGMRKTLVFYRDRAPNGIKTGWIMHEFRLE 138
                        **988899***************************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019418.76E-587155IPR003441NAC domain
PROSITE profilePS5100555.7510155IPR003441NAC domain
PfamPF023651.9E-2711137IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    Send to blast
MDLREIEATL PPGFRFYPSD EELVCHYLYR KITNEKVSKG TMVEVDLHTC EPWQLPDVAK  60
LGANDWYFFS FRERKYAIGL RTNRATVSGY WKATGKDRPI FSSVTREIVG MRKTLVFYRD  120
RAPNGIKTGW IMHEFRLELP TVPSKDWVLC RAFHKSKGDD FTTKHSFEDD FDTRTIGLSS  180
PPFASPPPPV DQTMQSNQQV IKPLLLSQTP QYSENFSSNN AFLNNIAYLN PNLLEIPLEG  240
NNLFNSESKG GGTAAADEYE FLYTMNLED*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A8e-47515610169Stress-induced transcription factor NAC1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010246799.11e-108PREDICTED: protein CUP-SHAPED COTYLEDON 3-like
TrEMBLA0A2G5DPP10.0A0A2G5DPP1_AQUCA; Uncharacterized protein
STRINGAquca_017_00744.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28530.17e-79NAC domain containing protein 74