PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe5G028000.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family ERF
Protein Properties Length: 142aa    MW: 16204.9 Da    PI: 4.8421
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe5G028000.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP238.82.4e-121055254
                AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkle 54
                        y GV +  +++++++eI+       + kr +lg+f t+eeAa+a+++a+   +
  Aqcoe5G028000.1.p 10 NYIGVQR--RNKKYASEICI------SgKRRWLGTFSTEEEAARAYDEAAYGAR 55
                       6899953..378*****999......44*********************98665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541711.37E-15966IPR016177DNA-binding domain
CDDcd000183.50E-19963No hitNo description
PfamPF008473.9E-71052IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.109.9E-191064IPR001471AP2/ERF domain
SMARTSM003802.4E-161070IPR001471AP2/ERF domain
PROSITE profilePS5103214.5391064IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 142 aa     Download sequence    Send to blast
MEMSITRKSN YIGVQRRNKK YASEICISGK RRWLGTFSTE EEAARAYDEA AYGARGFKAK  60
LNFSYNNILS QNLDTSLQVF SSASTIGNED AEENLFVQDD QQDNDFDDWV KYVQDNFSKK  120
KLMKWAGNLL DFLGESHGKE E*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5DK871e-74A0A2G5DK87_AQUCA; Uncharacterized protein
STRINGAquca_018_00164.12e-75(Aquilegia coerulea)