PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe5G038100.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family ERF
Protein Properties Length: 196aa    MW: 21910.1 Da    PI: 10.2412
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe5G038100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.31.2e-203887255
                AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                       +y+GVr ++ +gr++AeIrd ++    ++r +lg+f+taeeAa a+++a+++l+g
  Aqcoe5G038100.1.p 38 HYRGVRKRP-WGRFAAEIRDpWK----KTRKWLGTFDTAEEAALAYDEAARNLRG 87
                       6********.**********883....5*************************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000187.05E-303794No hitNo description
SuperFamilySSF541719.15E-223895IPR016177DNA-binding domain
PROSITE profilePS5103222.1683895IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.8E-313895IPR001471AP2/ERF domain
SMARTSM003803.3E-3238101IPR001471AP2/ERF domain
PfamPF008471.0E-133887IPR001471AP2/ERF domain
PRINTSPR003671.9E-103950IPR001471AP2/ERF domain
PRINTSPR003671.9E-106177IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    Send to blast
MAVELLHLRK EGFNLMTGTG EKEQVVTPVK GVQIKEAHYR GVRKRPWGRF AAEIRDPWKK  60
TRKWLGTFDT AEEAALAYDE AARNLRGPKA KTNFGDGGIL GSPFSPVNLH KQLHHWRTTY  120
AASAADGRNF YHPSSHYVPV GIPTGQISVM GSGPGMGFTG FKFEPLDRDR DREIIVKKEE  180
KKPLLFDLNL PPPPY*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-203594262ATERF1
3gcc_A2e-203594262ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010278126.11e-56PREDICTED: ethylene-responsive transcription factor 9-like
TrEMBLA0A2G5DNV81e-142A0A2G5DNV8_AQUCA; Uncharacterized protein
STRINGAquca_017_00628.11e-143(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20310.14e-26ethylene response factor 7