PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe5G038300.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bHLH
Protein Properties Length: 224aa    MW: 25911.2 Da    PI: 9.9921
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe5G038300.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH22.42.2e-0777121554
                        HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                        h   Er RR++ ++ +  L ++lP+      +K++K ++L++A  ++++L
  Aqcoe5G038300.1.p  77 HMVKERLRRNKQKQTYVALHSMLPPG-----TKNDKNSVLQMAALHLQEL 121
                        7789********************97.....8*************99998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474594.45E-1171141IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088811.70672121IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.3E-776138IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.34E-576126No hitNo description
SMARTSM003536.6E-578127IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009414Biological Processresponse to water deprivation
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    Send to blast
MDSFYLDDEI LWSAEPLPMI RSAFVPYTKP TVPFKLANLI KGRQNMNKRM IEFLRTLPRN  60
NTSCEHLEFE KERNYRHMVK ERLRRNKQKQ TYVALHSMLP PGTKNDKNSV LQMAALHLQE  120
LKGLKEELKK NLSHLNERAI QETTTIHLRW PFPSSGIDSM IGVLTCLKSM GLKARTIRSE  180
FSVGEFYSVL EIEQKVEAVV VEKAIQIALA DVERRVIYSI SHQ*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007034978.16e-55PREDICTED: transcription factor bHLH92
TrEMBLA0A2G5DNX11e-150A0A2G5DNX1_AQUCA; Uncharacterized protein
STRINGAquca_017_00627.11e-150(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43650.13e-28bHLH family protein