PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe5G084800.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family NAC
Protein Properties Length: 369aa    MW: 42308.8 Da    PI: 5.7587
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe5G084800.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM58.42.5e-18211741128
                NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv...ePwdLpkkvkaeekewyfFskrdkkya..tgkrknratksgyWkatg 87 
                        lppGfrF Pt +el+++yL +kv g++l++ +vi e  +y     eP+++   + ++e+ +y F+  +kk    +gk+  r t +g+W+ + 
  Aqcoe5G084800.1.p  21 LPPGFRFCPTKQELLKYYLYNKVVGEDLPALNVILEKTLYGDkaeEPSQIF--AGSSEEFLYIFTLVNKKFDnvNGKKMDRETGKGRWEMQN 110
                        79****************************9**999999865333788885..344556669999999987744799***********9876 PP

                NAM  88 kdkevlsk...kgelvglkktLvfy.....................kgrapkgektdWvmheyrl 128
                        + ++v++    +++++g  kt+ +                      k+ +++ ek +W+mhey++
  Aqcoe5G084800.1.p 111 N-HPVYDDppyQTTVIGYDKTFNYIknadkksnkmnskvrhgkresKKIKEDEEKISWIMHEYTF 174
                        5.8999988999999**********7777777666666665544433455566799*******86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019419.94E-2417194IPR003441NAC domain
PROSITE profilePS5100525.6121194IPR003441NAC domain
PfamPF023651.7E-1522173IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 369 aa     Download sequence    Send to blast
MEEEYMMMME SNGEEEAILV LPPGFRFCPT KQELLKYYLY NKVVGEDLPA LNVILEKTLY  60
GDKAEEPSQI FAGSSEEFLY IFTLVNKKFD NVNGKKMDRE TGKGRWEMQN NHPVYDDPPY  120
QTTVIGYDKT FNYIKNADKK SNKMNSKVRH GKRESKKIKE DEEKISWIMH EYTFEYAPSH  180
KQQAEWTICK IRKKISSKNK DVSMPESKRA RTSYALALPP KTAKPSDVRL LQKNHNQYLQ  240
STLVVMPGQQ KSDHPHPESQ PCTHFRHDSD KSETDSISWA MAYTPFAGAM SIISDVPPEH  300
SQPIQSYNPS PHDHIDALPV HQDDAIFSLD DLVQLPSLGE DDVYSLKKVQ SFTDMVLADD  360
DMNLPTLD*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1151159KRESKKIKE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5DLQ90.0A0A2G5DLQ9_AQUCA; Uncharacterized protein
STRINGAquca_017_00204.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27410.25e-15NAC family protein