PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe5G098300.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family ERF
Protein Properties Length: 173aa    MW: 18931 Da    PI: 5.6974
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe5G098300.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.56.7e-181564255
                AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                       +y+GVr +k +g+Wv+e+r+p   g + +r++lg+f t+e+Aa a++ a++ ++g
  Aqcoe5G098300.1.p 15 DYRGVRKRK-WGKWVCEVREP---G-TqTRVWLGSFATPEMAAIAHDVAALFFRG 64
                       69****999.*******9998...3.35***********************9998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103222.1681572IPR001471AP2/ERF domain
PfamPF008477.3E-131564IPR001471AP2/ERF domain
SMARTSM003808.5E-321578IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.109.1E-311674IPR001471AP2/ERF domain
PRINTSPR003679.7E-101627IPR001471AP2/ERF domain
SuperFamilySSF541711.83E-201672IPR016177DNA-binding domain
CDDcd000181.78E-281673No hitNo description
PRINTSPR003679.7E-103854IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 173 aa     Download sequence    Send to blast
MDQSTTQFNS AGRGDYRGVR KRKWGKWVCE VREPGTQTRV WLGSFATPEM AAIAHDVAAL  60
FFRGPQAKLN FPEMADKLPR PISSKPNDIR SAAHDAVSRF TTSTGASEIG GSSSNSVPTR  120
VTLSPSEIQA INDTTLDSPM WSELEFGLPD ISPFFTSFEY SDGEQHGSLW NI*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A6e-151672663ATERF1
3gcc_A6e-151672663ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00227DAPTransfer from AT1G71450Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023894545.11e-53ethylene-responsive transcription factor ERF021-like
SwissprotQ9C9I26e-48ERF21_ARATH; Ethylene-responsive transcription factor ERF021
TrEMBLA0A2G5DLU91e-124A0A2G5DLU9_AQUCA; Uncharacterized protein
STRINGAquca_017_00082.11e-125(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71450.12e-50ERF family protein