PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe5G103800.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family C2H2
Protein Properties Length: 297aa    MW: 31203.5 Da    PI: 8.9925
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe5G103800.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.70.00038108130123
                        EEETTTTEEESSHHHHHHHHHHT CS
            zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                        +kC+ C+ksFs+   L  H  +H
  Aqcoe5G103800.1.p 108 HKCTVCNKSFSSYQALGGHKASH 130
                        79**********99999998887 PP
2zf-C2H213.50.00021181203123
                        EEETTTTEEESSHHHHHHHHHHT CS
            zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                        ++C++C+ksF++   L  H r+H
  Aqcoe5G103800.1.p 181 HECSICHKSFPSGQALGGHKRRH 203
                        78*******************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576671.62E-7107130No hitNo description
PfamPF139122.9E-13108132IPR007087Zinc finger, C2H2
PROSITE profilePS501579.515108130IPR007087Zinc finger, C2H2
SMARTSM003550.011108130IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280110130IPR007087Zinc finger, C2H2
SuperFamilySSF576671.62E-7176203No hitNo description
PfamPF139121.4E-13180205IPR007087Zinc finger, C2H2
SMARTSM003550.033181203IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.515181203IPR007087Zinc finger, C2H2
PROSITE patternPS000280183203IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    Send to blast
MAIETLNSPT AVPPPSSSFR YQELTDTELH SIEPWVKRKR SKRPRHETPS TSSSSPSPSP  60
PHQPTEEEYL AYCLIMLARG GAGSTTSQPP SLLPLAPPTK GVFLVDQHKC TVCNKSFSSY  120
QALGGHKASH RKLSVSVIPS EHHHHNQVQA AVSNSSASAS TTSTTTASVI STVNQSSGRA  180
HECSICHKSF PSGQALGGHK RRHYDGGAAA TTTNNTGGAN GNGGGGRVGV TATVTSSDGI  240
GSSSQTQSLS QSQNQRGFDL NLPSLNEFWP GFGVSGVEEE VESPLPLKKP RFLIPA*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5DLK70.0A0A2G5DLK7_AQUCA; Uncharacterized protein
STRINGAquca_017_00038.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67450.11e-38zinc-finger protein 1