PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe5G106600.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family NAC
Protein Properties Length: 619aa    MW: 68691.3 Da    PI: 4.4935
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe5G106600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM164.44e-51291552128
                NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 
                        ppGfrF+Ptdeel+ +yLk+k+ +++l+l +vike+d+yk++P++Lp +  +++++++wyfF++rd+ky++  r+nrat++gyWkatgkd++
  Aqcoe5G106600.1.p  29 PPGFRFSPTDEELILYYLKRKICRRRLKL-NVIKETDVYKWDPEELPgQsILRNGDRQWYFFTPRDRKYPNAARSNRATRHGYWKATGKDRT 119
                        8****************************.99**************96446677999*********************************** PP

                NAM  92 vlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                        +   +++ vg+kktLvfykgrap+ge+tdWvmhey++
  Aqcoe5G106600.1.p 120 ISW-NSRSVGIKKTLVFYKGRAPSGERTDWVMHEYTM 155
                        *99.999****************************87 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.62E-5727178IPR003441NAC domain
PROSITE profilePS5100554.34528178IPR003441NAC domain
PfamPF023656.9E-2729154IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0070301Biological Processcellular response to hydrogen peroxide
GO:0005634Cellular Componentnucleus
GO:0005789Cellular Componentendoplasmic reticulum membrane
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 619 aa     Download sequence    Send to blast
MRITDSSYGG GCCGGGIKDD LFGEPKSWPP GFRFSPTDEE LILYYLKRKI CRRRLKLNVI  60
KETDVYKWDP EELPGQSILR NGDRQWYFFT PRDRKYPNAA RSNRATRHGY WKATGKDRTI  120
SWNSRSVGIK KTLVFYKGRA PSGERTDWVM HEYTMDENEL QRCKNVQNYY ALYKVFKKSG  180
PGPKNGEQYG APFREEDWAD DDELDESNAP NEVTQVQQNA SACDDSFYRC TPLVDDLDEL  240
LRCISDEPGV NQLPNSEVAC VQPQIGVQKE TQCTMMGLSH GEVIPCEPLQ WYPPQNQCEV  300
HGSFNDVQSS ATYLPSGEAP EVTSTSNFSE PDFHCSEGVN YLELDDLEGP QHLEVSSLIG  360
AAGDSFFRNM DGLIGAADDS LFQDMDGLLS AANDSLIQDG LNESDLYFDA AVFFQDFGTI  420
NQSSISAPYS DGLTGDLSTR VAYEMPTRLN DAGQMSGGQL WMQEQRYNVS MPAESNHVAM  480
DPRTSASIGI MHASSSTDLG KERHNLDDDE NDDIGSWFNS AISSLLGSVP TRPALASENA  540
LINRAFERMS SFGRVSIAAT DSSAATTGGG TVVERRVSRN GGLFFFSVLG LLCAFLWMLM  600
IGTTLKVLKS FFGRFISS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A3e-482915516140Stress-induced transcription factor NAC1
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00179DAPTransfer from AT1G34190Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010261099.10.0PREDICTED: NAC domain-containing protein 17-like
TrEMBLA0A2G5DLG90.0A0A2G5DLG9_AQUCA; Uncharacterized protein
STRINGAquca_017_00010.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34190.15e-96NAC domain containing protein 17