PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe5G117000.1.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

bZIP

Protein Properties

Length: 264aa MW: 30506.1 Da PI: 10.0539

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe5G117000.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	33.4	9.8e-11	27	60	5	38
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeL 38 k+ rr+++NReAAr+sR+RKka++++Le+ +L Aqcoe5G117000.1.p 27 KVLRRLAQNREAARKSRLRKKAYVQQLETSRLKL 60 789*************************865555 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	7.0E-6	23	86	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	8.6	25	67	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	8.9E-8	27	61	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	3.62E-7	27	67	No hit	No description
Gene3D	G3DSA:1.20.5.170	9.9E-8	29	70	No hit	No description
PROSITE pattern	PS00036	0	30	45	IPR004827	Basic-leucine zipper domain
Pfam	PF14144	3.2E-21	112	166	IPR025422	Transcription factor TGA like domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 264 aa Download sequence Send to blast
MTNKNIEKFF FPSCFFFGLP SLTTLKKVLR RLAQNREAAR KSRLRKKAYV QQLETSRLKL 60 TQIEQELDRA RQQGMYISGA LDTNHLGVSG TVNPGVAAFE MEHGHWSCAY WLHNGMNHYY 120 KLFQMKEICA KSDVFYLMSG MWRTSSERFF LWLGGFRPSE LLRVLRPQLD TLTEQQTFDV 180 CTLQHSSRQA EDALSQGMDQ FQLTRSICCR RLHADNLREQ ALQQMSHILT TRQAARGLLA 240 LGDYFQRLRA LSKVWAARPC EPA*

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1. Could also bind to the Hex-motif (5'-TGACGTGG-3') another cis-acting element found in plant histone promoters.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_026391400.1	1e-115	transcription factor TGA1-like
Swissprot	Q39237	1e-104	TGA1_ARATH; Transcription factor TGA1
TrEMBL	A0A2G5EMW1	0.0	A0A2G5EMW1_AQUCA; Uncharacterized protein
STRING	Aquca_007_00921.1	0.0	(Aquilegia coerulea)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65210.6	1e-108	bZIP family protein

Link Out ? help Back to Top
Phytozome	Aqcoe5G117000.1.p

Publications ? help Back to Top
Duarte JM, et al. Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. Mol. Biol. Evol., 2006. 23(2): p. 469-78 [PMID:16280546] Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Herrera-Vásquez A, et al. Transcriptional Control of Glutaredoxin GRXC9 Expression by a Salicylic Acid-Dependent and NPR1-Independent Pathway in Arabidopsis. Plant Mol. Biol. Rep., 2018. [PMID:26696694] Gutsche N,Zachgo S The N-Terminus of the Floral Arabidopsis TGA Transcription Factor PERIANTHIA Mediates Redox-Sensitive DNA-Binding. PLoS ONE, 2016. 11(4): p. e0153810 [PMID:27128442] Sun T, et al. TGACG-BINDING FACTOR 1 (TGA1) and TGA4 regulate salicylic acid and pipecolic acid biosynthesis by modulating the expression of SYSTEMIC ACQUIRED RESISTANCE DEFICIENT 1 (SARD1) and CALMODULIN-BINDING PROTEIN 60g (CBP60g). New Phytol., 2018. 217(1): p. 344-354 [PMID:28898429]