PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe5G139300.1.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

bHLH

Protein Properties

Length: 145aa MW: 16607.9 Da PI: 9.6575

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe5G139300.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	34.6	3.4e-11	50	90	10	54
HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r RR+++Ns++ Lr+ +P++ s+K + ++i++ A++YI++L Aqcoe5G139300.1.p 50 RARREELNSKYIALRQQIPNP----STKRDRSSIVKDAIRYIHEL 90 89****************9....9**************998 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	12.405	40	90	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	1.11E-12	45	105	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	5.39E-8	50	90	No hit	No description
Pfam	PF00010	1.4E-8	50	90	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	1.2E-6	50	96	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	1.7E-9	50	103	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 145 aa Download sequence Send to blast
MYEPRIASVV YQDGEWKKLP DNSSSDMMKV LSGLVKLTKP SVDFHFPGQR ARREELNSKY 60 IALRQQIPNP STKRDRSSIV KDAIRYIHEL TTTVDELRIL VEKKRKRNDT REMEEGFYSD 120 SPHSNTTVAS DSGFVVSFPL FLLV*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	96	105	LRILVEKKRK

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010243136.1	1e-20	PREDICTED: transcription factor EAT1-like
Refseq	XP_010243137.1	1e-20	PREDICTED: transcription factor EAT1-like
Refseq	XP_010243138.1	1e-20	PREDICTED: transcription factor EAT1-like
TrEMBL	A0A2G5ELK2	2e-94	A0A2G5ELK2_AQUCA; Uncharacterized protein
STRING	Aquca_007_00768.1	3e-95	(Aquilegia coerulea)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06170.2	6e-15	bHLH family protein

Link Out ? help Back to Top
Phytozome	Aqcoe5G139300.1.p