PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe5G141100.1.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

FAR1

Protein Properties

Length: 767aa MW: 88234.5 Da PI: 8.0415

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe5G141100.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	74.1	2.9e-23	61	147	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn+YAk++GFsvrk ++kk+ +n+ei+++++vC kegk + ++ +++r+r + r gCka++ v+k+++gk++vt +++ HnH+l+ Aqcoe5G141100.1.p 61 EFYNAYAKHAGFSVRKWAEKKN-KNKEIIRKEYVCFKEGKCSIVEEV--EKSRRRGSVREGCKARIAVSKSSNGKFVVTLIVEGHNHPLS 147 6**************99998.7777*********9998766..99999********************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	1.2E-20	61	147	IPR004330	FAR1 DNA binding domain
Pfam	PF10551	6.3E-31	268	361	IPR018289	MULE transposase domain
PROSITE profile	PS50966	10.868	548	584	IPR007527	Zinc finger, SWIM-type
SMART	SM00575	0.0016	559	587	IPR006564	Zinc finger, PMZ-type
Pfam	PF04434	6.3E-5	560	578	IPR007527	Zinc finger, SWIM-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0008270	Molecular Function	zinc ion binding

Sequence ? help Back to Top
Protein Sequence Length: 767 aa Download sequence Send to blast
MDNIEPENEF FEVNGQGNDM EEVAMGENVD ESSKCDIIPQ VPNDLKPMRG QEFSSLDEVL 60 EFYNAYAKHA GFSVRKWAEK KNKNKEIIRK EYVCFKEGKC SIVEEVEKSR RRGSVREGCK 120 ARIAVSKSSN GKFVVTLIVE GHNHPLSTPR KTHLLRSHRE VSSAHKCLSQ QLSMVNIPTH 180 QQYNFFGVQA GGFENIGCTQ KDLYNYNRDV RKELKGHDAE MFREYLKSEE EKNPSFTYNI 240 DVDDEQRICR AFWADATSRR DYALYGDVVV FDTTYDTNRY KLILAPLMGV NNHGQTIIFG 300 CAFLSDETIP SFIWLLKQFL LAMPGDAPKM IITDQDPAMT NAIAQTLPST FHKYCSWHIL 360 NKFSEKLDAV KYSVYYKEFY YCIWNSKSKE EFDLVWLELV QRSGLQDNKW LRSMFEIRLK 420 WVPAYTKHVF SAEMTSSQRA ESSHSFFKKY VGEDNSMVDF MVQFDRGLQK QRHEALIADN 480 KDVIEKPKLK MLNDILMQMV DIYTNEIFYK FQSELLESFN YKFQLINETD THRVCRTQRK 540 NVETDKGRQV SYEKDSDYVS CTCNKFESMG IPCRHVLAYL HKYTDFEKLP SHYILKRWKK 600 SAKSETVIDC TGIEIVDNKS YFLERSRLIQ CCLGVVNKAL TSEEAKKVLI DSLCSAEEKI 660 NLLVDSGRKE KKISGTCGKR TREMVDNVAD AELAEQMNCE EVATYREPNQ VRAKGSGKRI 720 KGGKEKALGS SRKEPKGRLC KGCGERGVGH DVRTCPKVVG ASLSQP*

Sequence ? help Back to Top

Protein Sequence Length: 767 aa Download sequence Send to blast

MDNIEPENEF FEVNGQGNDM EEVAMGENVD ESSKCDIIPQ VPNDLKPMRG QEFSSLDEVL  60
EFYNAYAKHA GFSVRKWAEK KNKNKEIIRK EYVCFKEGKC SIVEEVEKSR RRGSVREGCK  120
ARIAVSKSSN GKFVVTLIVE GHNHPLSTPR KTHLLRSHRE VSSAHKCLSQ QLSMVNIPTH  180
QQYNFFGVQA GGFENIGCTQ KDLYNYNRDV RKELKGHDAE MFREYLKSEE EKNPSFTYNI  240
DVDDEQRICR AFWADATSRR DYALYGDVVV FDTTYDTNRY KLILAPLMGV NNHGQTIIFG  300
CAFLSDETIP SFIWLLKQFL LAMPGDAPKM IITDQDPAMT NAIAQTLPST FHKYCSWHIL  360
NKFSEKLDAV KYSVYYKEFY YCIWNSKSKE EFDLVWLELV QRSGLQDNKW LRSMFEIRLK  420
WVPAYTKHVF SAEMTSSQRA ESSHSFFKKY VGEDNSMVDF MVQFDRGLQK QRHEALIADN  480
KDVIEKPKLK MLNDILMQMV DIYTNEIFYK FQSELLESFN YKFQLINETD THRVCRTQRK  540
NVETDKGRQV SYEKDSDYVS CTCNKFESMG IPCRHVLAYL HKYTDFEKLP SHYILKRWKK  600
SAKSETVIDC TGIEIVDNKS YFLERSRLIQ CCLGVVNKAL TSEEAKKVLI DSLCSAEEKI  660
NLLVDSGRKE KKISGTCGKR TREMVDNVAD AELAEQMNCE EVATYREPNQ VRAKGSGKRI  720
KGGKEKALGS SRKEPKGRLC KGCGERGVGH DVRTCPKVVG ASLSQP*

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020272573.1	0.0	protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A2G5CJ92	0.0	A0A2G5CJ92_AQUCA; Uncharacterized protein
STRING	Aquca_050_00023.1	0.0	(Aquilegia coerulea)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-116	FAR1-related sequence 5

Link Out ? help Back to Top
Phytozome	Aqcoe5G141100.1.p